Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RNU6-1183P-201ENST00000517054 60 ntBASIC3.78□□□□□ -1.8
PTPN1P18031 CYCSP39-201ENST00000565821 309 ntBASIC3.78□□□□□ -1.8
PTPN1P18031 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPN1P18031 AC009318.2-201ENST00000610917 651 ntBASIC3.78□□□□□ -1.8
PTPN1P18031 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.78□□□□□ -1.8
PTPN1P18031 U4.6-201ENST00000621618 127 ntBASIC3.78□□□□□ -1.8
PTPN1P18031 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPN1P18031 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PTPN1P18031 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPN1P18031 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
PTPN1P18031 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PTPN1P18031 RNU6-227P-201ENST00000362865 103 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 SNORD50.1-201ENST00000362987 71 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 SNORA70.4-201ENST00000365509 134 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 RNU6-658P-201ENST00000384606 106 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 U3.37-201ENST00000408528 213 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 CRYBB2P1-203ENST00000415709 538 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN1P18031 OR2AQ1P-201ENST00000451972 200 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 MTCO3P8-201ENST00000453691 755 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 RPL21P104-201ENST00000464143 478 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.77□□□□□ -1.81
PTPN1P18031 RNU1-103P-201ENST00000516502 125 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.77□□□□□ -1.81
PTPN1P18031 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.77□□□□□ -1.81
PTPN1P18031 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 AC010186.2-204ENST00000537668 439 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPN1P18031 H3F3AP1-201ENST00000559984 334 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPN1P18031 MIR7851-201ENST00000610611 160 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 AP003355.3-201ENST00000623465 114 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.77□□□□□ -1.81
PTPN1P18031 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTPN1P18031 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
PTPN1P18031 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN1P18031 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PTPN1P18031 AC090740.1-201ENST00000623193 2262 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN1P18031 Y_RNA.188-201ENST00000363952 111 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 Z98749.2-208ENST00000381646 500 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 Y_RNA.526-201ENST00000384572 110 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 U3.39-201ENST00000408569 239 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN1P18031 CBX3P6-201ENST00000430257 527 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPN1P18031 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN1P18031 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN1P18031 RPL21P2-201ENST00000440049 481 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 RPS3AP12-201ENST00000443616 753 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN1P18031 MTATP6P7-201ENST00000453315 681 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 RBMY2UP-201ENST00000453474 324 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 AC079354.2-201ENST00000453523 154 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 U3.44-201ENST00000458938 192 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 RN7SL293P-201ENST00000481765 281 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 RPL30P10-201ENST00000488148 337 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 LINC00933-203ENST00000559812 219 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 MIR3668-201ENST00000582138 75 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN1P18031 AC008962.1-201ENST00000605729 304 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 AC069200.1-201ENST00000609511 323 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 AC090425.1-201ENST00000610007 140 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN1P18031 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 U2.1-201ENST00000618978 145 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.76□□□□□ -1.81
PTPN1P18031 U2.21-201ENST00000637295 81 ntBASIC3.76□□□□□ -1.81
PTPN1P18031 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PTPN1P18031 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PTPN1P18031 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.76□□□□□ -1.81
PTPN1P18031 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPN1P18031 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.76□□□□□ -1.81
PTPN1P18031 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN1P18031 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.75□□□□□ -1.81
PTPN1P18031 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN1P18031 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN1P18031 AC032011.1-201ENST00000611703 1549 ntBASIC3.75□□□□□ -1.81
PTPN1P18031 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN1P18031 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PTPN1P18031 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN1P18031 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPN1P18031 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
PTPN1P18031 RNU6-778P-201ENST00000363269 103 ntBASIC3.75□□□□□ -1.81
PTPN1P18031 SNORD6-201ENST00000365444 73 ntBASIC3.75□□□□□ -1.81
PTPN1P18031 SNORA63.7-201ENST00000365579 123 ntBASIC3.75□□□□□ -1.81
PTPN1P18031 SAR1AP2-201ENST00000392696 594 ntBASIC3.75□□□□□ -1.81
PTPN1P18031 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms