Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL11A2P13942 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
COL11A2P13942 RNA5SP289-201ENST00000362332 137 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 SNORD62.1-201ENST00000362541 86 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 Y_RNA.314-201ENST00000365114 102 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 RNU4-70P-201ENST00000384579 139 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 MIR196B-201ENST00000384852 84 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 AL138827.1-201ENST00000402666 306 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.5□□□□□ -1.85
COL11A2P13942 AC092447.6-201ENST00000414578 210 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.5□□□□□ -1.85
COL11A2P13942 UBE2V1P4-201ENST00000425374 344 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.5□□□□□ -1.85
COL11A2P13942 GAPDHP27-201ENST00000447427 1020 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 AL031274.1-201ENST00000450334 232 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 AL353752.1-201ENST00000454946 260 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.5□□□□□ -1.85
COL11A2P13942 RNU7-187P-201ENST00000458985 68 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.5□□□□□ -1.85
COL11A2P13942 RNU6-1143P-201ENST00000516125 104 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 AF186190.1-201ENST00000517470 480 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.5□□□□□ -1.85
COL11A2P13942 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.5□□□□□ -1.85
COL11A2P13942 AL450472.3-201ENST00000615578 367 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 AC107027.3-201ENST00000565095 3473 ntBASIC3.5□□□□□ -1.85
COL11A2P13942 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.49□□□□□ -1.85
COL11A2P13942 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL11A2P13942 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.49□□□□□ -1.85
COL11A2P13942 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL11A2P13942 Y_RNA.447-201ENST00000384184 113 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 Y_RNA.577-201ENST00000384794 101 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 AC009963.1-201ENST00000417265 157 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 AC243428.1-201ENST00000421099 264 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.49□□□□□ -1.85
COL11A2P13942 RPL30P3-201ENST00000424262 333 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.49□□□□□ -1.85
COL11A2P13942 HMGB3P30-201ENST00000457863 606 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.49□□□□□ -1.85
COL11A2P13942 RPL31P60-201ENST00000478450 367 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 AC108860.1-201ENST00000484521 383 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 AC022493.2-201ENST00000506122 481 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 AC009901.1-201ENST00000506703 541 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 RNU6-475P-201ENST00000516073 104 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 RNY3P15-201ENST00000516297 97 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 SNORA40.14-201ENST00000516543 86 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 Y_RNA.715-201ENST00000517082 110 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 RN7SKP258-201ENST00000517151 304 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 RN7SKP40-201ENST00000517211 242 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 AC022790.1-201ENST00000522872 204 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 OR5D17P-201ENST00000531492 978 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.49□□□□□ -1.85
COL11A2P13942 MIR4425-201ENST00000580572 84 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 BDH2P1-201ENST00000602288 736 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 AC006254.3-201ENST00000603353 884 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 AC064859.1-201ENST00000624741 174 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 MIR4275-201ENST00000636486 87 ntBASIC3.49□□□□□ -1.85
COL11A2P13942 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
COL11A2P13942 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL11A2P13942 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL11A2P13942 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.48□□□□□ -1.85
COL11A2P13942 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL11A2P13942 Y_RNA.350-201ENST00000365409 98 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 Y_RNA.380-201ENST00000365663 111 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 Y_RNA.396-201ENST00000383949 103 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 RPS15AP40-201ENST00000419621 391 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 MTCO3P8-201ENST00000453691 755 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.48□□□□□ -1.85
COL11A2P13942 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.48□□□□□ -1.85
COL11A2P13942 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.48□□□□□ -1.85
COL11A2P13942 AC096745.1-201ENST00000509945 370 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 Y_RNA.668-201ENST00000516233 93 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 SNORD116.3-201ENST00000517176 78 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 MIR5692A1-201ENST00000580523 69 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 AC006111.3-201ENST00000622137 383 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL11A2P13942 MTND5P27-201ENST00000428871 1720 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 PABPC1P7-201ENST00000413177 1513 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL11A2P13942 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL11A2P13942 PHKBP1-201ENST00000450951 1951 ntBASIC3.48□□□□□ -1.85
COL11A2P13942 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL11A2P13942 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.48□□□□□ -1.85
COL11A2P13942 MIR184-201ENST00000384962 84 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 RNU6-821P-201ENST00000390995 107 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 RPL21P1-201ENST00000399532 476 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 MIR1183-201ENST00000408856 89 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 RNU6-174P-201ENST00000410406 106 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 RNU2-64P-201ENST00000411315 191 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.47□□□□□ -1.85
COL11A2P13942 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.47□□□□□ -1.85
COL11A2P13942 AC004866.2-201ENST00000438285 481 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 AC010095.1-201ENST00000443543 144 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 AC073910.1-201ENST00000445047 438 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 RPL29P29-201ENST00000448725 423 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 HMGB1P25-201ENST00000468402 607 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 RPL21P103-201ENST00000479921 488 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 RNU4-77P-201ENST00000516692 156 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 AC078899.3-201ENST00000599065 212 ntBASIC3.47□□□□□ -1.85
COL11A2P13942 MTND4LP5-201ENST00000605152 292 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms