Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 U6.106-201ENST00000636360 105 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 AL356489.2-201ENST00000566968 3528 ntBASIC4.49□□□□□ -1.69
HOXD8P13378 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD8P13378 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD8P13378 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD8P13378 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXD8P13378 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD8P13378 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD8P13378 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD8P13378 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD8P13378 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD8P13378 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD8P13378 RNA5SP124-201ENST00000362739 110 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 Y_RNA.319-201ENST00000365138 92 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD8P13378 RNU6-658P-201ENST00000384606 106 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 RNA5SP146-201ENST00000410743 123 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 AL390729.2-201ENST00000416137 156 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD8P13378 SETP5-201ENST00000437270 562 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD8P13378 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXD8P13378 AP001025.1-201ENST00000486139 332 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 AF186996.7-201ENST00000492781 209 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 RNU7-200P-201ENST00000516105 62 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.48□□□□□ -1.69
HOXD8P13378 AK6P2-201ENST00000549020 471 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXD8P13378 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 AC020895.1-201ENST00000595362 272 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 AC008749.1-201ENST00000597650 306 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 AC068831.7-201ENST00000616954 363 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 AC024581.2-201ENST00000619986 252 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 AC091953.5-201ENST00000622919 233 ntBASIC4.48□□□□□ -1.69
HOXD8P13378 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD8P13378 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXD8P13378 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
HOXD8P13378 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXD8P13378 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD8P13378 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
HOXD8P13378 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD8P13378 AC106871.1-201ENST00000568324 3102 ntBASIC4.47□□□□□ -1.69
HOXD8P13378 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD8P13378 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD8P13378 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD8P13378 MIR410-201ENST00000362222 80 ntBASIC4.47□□□□□ -1.69
HOXD8P13378 RNU6-626P-201ENST00000363354 107 ntBASIC4.47□□□□□ -1.69
HOXD8P13378 SNORA9-201ENST00000384215 133 ntBASIC4.47□□□□□ -1.69
HOXD8P13378 RNU6-1289P-201ENST00000384431 106 ntBASIC4.47□□□□□ -1.69
HOXD8P13378 Z82210.1-201ENST00000440037 231 ntBASIC4.47□□□□□ -1.69
HOXD8P13378 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD8P13378 AC009237.8-201ENST00000445492 379 ntBASIC4.47□□□□□ -1.69
HOXD8P13378 RN7SKP49-201ENST00000516675 260 ntBASIC4.47□□□□□ -1.69
HOXD8P13378 CYCSP30-201ENST00000546447 172 ntBASIC4.47□□□□□ -1.69
HOXD8P13378 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXD8P13378 MIR3144-201ENST00000579460 79 ntBASIC4.47□□□□□ -1.69
HOXD8P13378 AL121772.2-201ENST00000614331 297 ntBASIC4.47□□□□□ -1.69
HOXD8P13378 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXD8P13378 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD8P13378 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HOXD8P13378 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
HOXD8P13378 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD8P13378 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD8P13378 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
HOXD8P13378 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXD8P13378 LINC01355-201ENST00000566551 5444 ntBASIC4.46□□□□□ -1.69
HOXD8P13378 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HOXD8P13378 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HOXD8P13378 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXD8P13378 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HOXD8P13378 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXD8P13378 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXD8P13378 AC008725.1-201ENST00000605123 2263 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXD8P13378 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXD8P13378 SNORA63.1-201ENST00000362493 131 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.82-201ENST00000363000 102 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.92-201ENST00000363043 102 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.235-201ENST00000364412 102 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.306-201ENST00000365015 102 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 RNU1-140P-201ENST00000365040 165 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.308-201ENST00000365043 101 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.312-201ENST00000365089 102 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.322-201ENST00000365151 102 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 RNU6-1175P-201ENST00000365200 107 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.331-201ENST00000365267 102 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 WARS2P1-201ENST00000429678 537 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXD8P13378 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXD8P13378 AC096638.1-201ENST00000444678 216 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 SSXP4-201ENST00000451349 245 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.650-201ENST00000459002 102 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 SNORA70.16-201ENST00000516390 95 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.777-201ENST00000516982 102 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 MTND5P41-201ENST00000517498 206 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.771-201ENST00000598668 102 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 AC024153.1-201ENST00000603103 365 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 AC008739.3-201ENST00000603262 127 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms