Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MTCYBP8-201ENST00000422855 651 ntBASIC2.42□□□□□ -2.02
VIMP08670 USP9YP14-201ENST00000430663 563 ntBASIC2.42□□□□□ -2.02
VIMP08670 AL139132.1-201ENST00000431587 344 ntBASIC2.42□□□□□ -2.02
VIMP08670 HIGD1AP13-201ENST00000509878 289 ntBASIC2.42□□□□□ -2.02
VIMP08670 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.42□□□□□ -2.02
VIMP08670 AP000889.2-201ENST00000532684 490 ntBASIC2.42□□□□□ -2.02
VIMP08670 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.42□□□□□ -2.02
VIMP08670 AL133241.1-201ENST00000556832 487 ntBASIC2.42□□□□□ -2.02
VIMP08670 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.42□□□□□ -2.02
VIMP08670 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.42□□□□□ -2.02
VIMP08670 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.42□□□□□ -2.02
VIMP08670 ELOCP29-201ENST00000588193 334 ntBASIC2.42□□□□□ -2.02
VIMP08670 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.42□□□□□ -2.02
VIMP08670 AC007179.3-201ENST00000604976 235 ntBASIC2.42□□□□□ -2.02
VIMP08670 Z99129.1-201ENST00000612510 255 ntBASIC2.42□□□□□ -2.02
VIMP08670 AC009090.3-201ENST00000616553 565 ntBASIC2.42□□□□□ -2.02
VIMP08670 AC022418.1-201ENST00000624118 445 ntBASIC2.42□□□□□ -2.02
VIMP08670 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
VIMP08670 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
VIMP08670 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VIMP08670 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VIMP08670 RNU6-1010P-201ENST00000362757 107 ntBASIC2.41□□□□□ -2.02
VIMP08670 SNORD56.1-201ENST00000362913 68 ntBASIC2.41□□□□□ -2.02
VIMP08670 RNU6-7-201ENST00000364784 107 ntBASIC2.41□□□□□ -2.02
VIMP08670 RNU5E-7P-201ENST00000365290 117 ntBASIC2.41□□□□□ -2.02
VIMP08670 RNU6-8-201ENST00000365467 107 ntBASIC2.41□□□□□ -2.02
VIMP08670 RNU6-517P-201ENST00000384362 110 ntBASIC2.41□□□□□ -2.02
VIMP08670 RNU6-434P-201ENST00000384376 107 ntBASIC2.41□□□□□ -2.02
VIMP08670 RNU2-66P-201ENST00000410650 161 ntBASIC2.41□□□□□ -2.02
VIMP08670 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.41□□□□□ -2.02
VIMP08670 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.41□□□□□ -2.02
VIMP08670 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.41□□□□□ -2.02
VIMP08670 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.41□□□□□ -2.02
VIMP08670 PRPS1P1-201ENST00000445305 876 ntBASIC2.41□□□□□ -2.02
VIMP08670 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.41□□□□□ -2.02
VIMP08670 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.41□□□□□ -2.02
VIMP08670 SNRPFP3-201ENST00000457792 225 ntBASIC2.41□□□□□ -2.02
VIMP08670 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.41□□□□□ -2.02
VIMP08670 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.41□□□□□ -2.02
VIMP08670 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.41□□□□□ -2.02
VIMP08670 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.41□□□□□ -2.02
VIMP08670 AF213884.2-201ENST00000510417 903 ntBASIC2.41□□□□□ -2.02
VIMP08670 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.41□□□□□ -2.02
VIMP08670 RNU2-69P-201ENST00000516061 100 ntBASIC2.41□□□□□ -2.02
VIMP08670 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.41□□□□□ -2.02
VIMP08670 AP005902.1-201ENST00000521358 186 ntBASIC2.41□□□□□ -2.02
VIMP08670 HIF1AP1-201ENST00000553642 175 ntBASIC2.41□□□□□ -2.02
VIMP08670 SNORD53-201ENST00000579969 78 ntBASIC2.41□□□□□ -2.02
VIMP08670 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.41□□□□□ -2.02
VIMP08670 AC078795.2-201ENST00000602835 1252 ntBASIC2.41□□□□□ -2.02
VIMP08670 AC073410.2-201ENST00000603240 332 ntBASIC2.41□□□□□ -2.02
VIMP08670 SNORD14A-201ENST00000606526 91 ntBASIC2.41□□□□□ -2.02
VIMP08670 AP001596.2-201ENST00000608410 312 ntBASIC2.41□□□□□ -2.02
VIMP08670 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.41□□□□□ -2.02
VIMP08670 AC092608.2-201ENST00000624427 218 ntBASIC2.41□□□□□ -2.02
VIMP08670 Z69720.2-201ENST00000624755 279 ntBASIC2.41□□□□□ -2.02
VIMP08670 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.41□□□□□ -2.02
VIMP08670 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VIMP08670 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VIMP08670 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VIMP08670 RNU6-37P-201ENST00000362692 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-859P-201ENST00000362728 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 SNORA3A-201ENST00000364113 130 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-11P-201ENST00000364234 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-996P-201ENST00000365438 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-25P-201ENST00000383873 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-1-201ENST00000383898 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-48P-201ENST00000384161 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-36P-201ENST00000384172 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-4P-201ENST00000384205 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-5P-201ENST00000384238 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-3P-201ENST00000384314 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-16P-201ENST00000384385 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU1-57P-201ENST00000384491 166 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-15P-201ENST00000384534 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-2-201ENST00000384627 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-29P-201ENST00000384637 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-9-201ENST00000384776 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-33P-201ENST00000384793 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 RNU6-1158P-201ENST00000391167 107 ntBASIC2.4□□□□□ -2.03
VIMP08670 AL355497.1-201ENST00000406262 551 ntBASIC2.4□□□□□ -2.03
VIMP08670 U3.40-201ENST00000408706 208 ntBASIC2.4□□□□□ -2.03
VIMP08670 HMGB3P2-201ENST00000411913 584 ntBASIC2.4□□□□□ -2.03
VIMP08670 OR9R1P-201ENST00000412200 877 ntBASIC2.4□□□□□ -2.03
VIMP08670 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.4□□□□□ -2.03
VIMP08670 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.4□□□□□ -2.03
VIMP08670 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.4□□□□□ -2.03
VIMP08670 AC008267.5-201ENST00000424928 265 ntBASIC2.4□□□□□ -2.03
VIMP08670 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.4□□□□□ -2.03
VIMP08670 MTCYBP40-201ENST00000509390 1135 ntBASIC2.4□□□□□ -2.03
VIMP08670 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.4□□□□□ -2.03
VIMP08670 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.4□□□□□ -2.03
VIMP08670 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.4□□□□□ -2.03
VIMP08670 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.4□□□□□ -2.03
VIMP08670 AC079600.2-201ENST00000550076 130 ntBASIC2.4□□□□□ -2.03
VIMP08670 PSMA3P-201ENST00000555485 635 ntBASIC2.4□□□□□ -2.03
VIMP08670 AC027176.1-201ENST00000560204 514 ntBASIC2.4□□□□□ -2.03
VIMP08670 MIR5583-1-201ENST00000580941 59 ntBASIC2.4□□□□□ -2.03
VIMP08670 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.4□□□□□ -2.03
VIMP08670 AC090897.2-201ENST00000581715 130 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms