Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
MT-ND4P03905 RNU6-641P-201ENST00000384006 107 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 Y_RNA.500-201ENST00000384466 111 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 RPL23AP32-201ENST00000395315 459 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 RPS3AP36-201ENST00000398190 775 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 EEF1A1P40-201ENST00000412883 573 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.53□□□□□ -2.16
MT-ND4P03905 AC244636.1-201ENST00000421152 228 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 AC010099.3-201ENST00000423896 409 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 CALM2P2-201ENST00000428512 440 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.53□□□□□ -2.16
MT-ND4P03905 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.53□□□□□ -2.16
MT-ND4P03905 UBE2D3P4-201ENST00000441973 436 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 TAF9P1-201ENST00000445421 515 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 AL360271.2-201ENST00000447710 161 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.53□□□□□ -2.16
MT-ND4P03905 AC012308.1-201ENST00000451232 178 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 TAF9P2-201ENST00000454958 515 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 RAP1BP2-201ENST00000478270 544 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.53□□□□□ -2.16
MT-ND4P03905 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.53□□□□□ -2.16
MT-ND4P03905 ANXA2P1-201ENST00000505539 926 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 AC005178.1-201ENST00000508392 440 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 Y_RNA.687-201ENST00000516558 91 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.53□□□□□ -2.16
MT-ND4P03905 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.53□□□□□ -2.16
MT-ND4P03905 CBX3P4-201ENST00000538909 354 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 AC007375.1-201ENST00000554513 578 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 AC008521.1-201ENST00000587471 187 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.53□□□□□ -2.16
MT-ND4P03905 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.53□□□□□ -2.16
MT-ND4P03905 AC091304.9-201ENST00000612091 226 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 uc_338.15-201ENST00000615470 191 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
MT-ND4P03905 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
MT-ND4P03905 Y_RNA.40-201ENST00000362645 93 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 RNU4-42P-201ENST00000364738 142 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 RNU6-487P-201ENST00000365430 104 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 SNORD116-20-201ENST00000384529 92 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
MT-ND4P03905 PGBD4P6-201ENST00000421501 610 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.52□□□□□ -2.17
MT-ND4P03905 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.52□□□□□ -2.17
MT-ND4P03905 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 KATNBL1P6-201ENST00000453433 915 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 HMGB1P35-201ENST00000503360 598 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 RNU1-86P-201ENST00000516108 154 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 RNU1-107P-201ENST00000516617 154 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 RNU6-586P-201ENST00000517265 104 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.52□□□□□ -2.17
MT-ND4P03905 AC109329.1-201ENST00000518744 317 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.52□□□□□ -2.17
MT-ND4P03905 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.52□□□□□ -2.17
MT-ND4P03905 RANP3-201ENST00000530970 276 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 IMMP1LP2-201ENST00000552954 492 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 AC091544.4-201ENST00000555268 342 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.52□□□□□ -2.17
MT-ND4P03905 AC090616.2-202ENST00000584248 222 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 MIR548AB-201ENST00000584917 84 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 AC005771.1-201ENST00000585581 349 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 AC009977.1-201ENST00000586015 570 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 WISP1-OT1-201ENST00000602893 642 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 ELOCP5-201ENST00000604924 333 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 AL121992.2-201ENST00000606262 256 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.52□□□□□ -2.17
MT-ND4P03905 AC131159.1-201ENST00000621854 213 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 HAUS6P2-201ENST00000433254 2404 ntBASIC1.52□□□□□ -2.17
MT-ND4P03905 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
MT-ND4P03905 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.51□□□□□ -2.17
MT-ND4P03905 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.51□□□□□ -2.17
MT-ND4P03905 RNU6-371P-201ENST00000364283 108 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 Y_RNA.560-201ENST00000384689 102 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
MT-ND4P03905 AL079342.1-201ENST00000401460 267 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 RPS20P15-201ENST00000412792 311 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 MTCO3P5-201ENST00000433620 714 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 AC104850.1-201ENST00000435940 476 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 IFNA20P-201ENST00000436840 528 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 MTND6P13-201ENST00000443510 523 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.51□□□□□ -2.17
MT-ND4P03905 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.51□□□□□ -2.17
MT-ND4P03905 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.51□□□□□ -2.17
MT-ND4P03905 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.51□□□□□ -2.17
MT-ND4P03905 SCARNA24.1-201ENST00000516465 137 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 RNU2-46P-201ENST00000517038 113 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.51□□□□□ -2.17
MT-ND4P03905 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.51□□□□□ -2.17
MT-ND4P03905 NDUFA5P6-201ENST00000542110 379 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 BNIP3P6-201ENST00000549284 499 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 ZNF321P-202ENST00000550843 495 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 HSBP1P1-201ENST00000555205 166 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.51□□□□□ -2.17
MT-ND4P03905 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.51□□□□□ -2.17
MT-ND4P03905 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.51□□□□□ -2.17
MT-ND4P03905 AC012065.4-201ENST00000602445 679 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 AL353778.1-201ENST00000603149 408 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.51□□□□□ -2.17
MT-ND4P03905 AC009159.2-201ENST00000617603 606 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 AL359740.1-201ENST00000624340 592 ntBASIC1.51□□□□□ -2.17
MT-ND4P03905 AC019226.2-201ENST00000625973 424 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms