Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MIR6873-201ENST00000622788 63 ntBASIC2.66□□□□□ -1.98
COL2A1P02458 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.66□□□□□ -1.98
COL2A1P02458 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
COL2A1P02458 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL2A1P02458 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL2A1P02458 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL2A1P02458 MIR21-201ENST00000362134 72 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 Y_RNA.197-201ENST00000364004 102 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 Y_RNA.234-201ENST00000364409 97 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 Y_RNA.339-201ENST00000365325 102 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 SNORD82-201ENST00000365530 70 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 U8.13-201ENST00000390842 128 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 RNU2-39P-201ENST00000410604 198 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.65□□□□□ -1.98
COL2A1P02458 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.65□□□□□ -1.98
COL2A1P02458 AC108059.2-201ENST00000434626 151 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 AC079781.2-201ENST00000446424 169 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 AL356010.1-201ENST00000456364 102 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 AC012181.1-201ENST00000479895 423 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 RPS27P27-201ENST00000498779 255 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 SNORD116-26-201ENST00000516006 96 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 SNORA25.17-201ENST00000517184 124 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 HSPE1P18-201ENST00000517602 280 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 AP003072.2-201ENST00000527756 676 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 AP005435.4-201ENST00000529514 284 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.65□□□□□ -1.98
COL2A1P02458 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.65□□□□□ -1.98
COL2A1P02458 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
COL2A1P02458 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.65□□□□□ -1.98
COL2A1P02458 AC023043.2-201ENST00000589678 1026 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 VN1R84P-201ENST00000593697 235 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 AL645944.1-201ENST00000603857 493 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 AC022893.3-201ENST00000607665 437 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.65□□□□□ -1.98
COL2A1P02458 AP001350.1-201ENST00000601906 1524 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.65□□□□□ -1.98
COL2A1P02458 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.65□□□□□ -1.99
COL2A1P02458 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL2A1P02458 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
COL2A1P02458 RNU6-552P-201ENST00000362869 119 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 RNU1-91P-201ENST00000364746 163 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 RNU6-331P-201ENST00000384724 107 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 SNORA80E-201ENST00000384744 137 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 MIR489-201ENST00000384923 84 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.65□□□□□ -1.99
COL2A1P02458 AC005517.2-201ENST00000424673 553 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 AL358176.2-201ENST00000425769 204 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 USP9YP16-201ENST00000430287 407 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL2A1P02458 DDX3P2-201ENST00000446138 111 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.65□□□□□ -1.99
COL2A1P02458 HMGB3P21-201ENST00000452483 547 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 USP9YP23-201ENST00000455085 407 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.65□□□□□ -1.99
COL2A1P02458 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.65□□□□□ -1.99
COL2A1P02458 snoU13.7-201ENST00000459220 104 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
COL2A1P02458 AC091885.1-201ENST00000506658 268 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.65□□□□□ -1.99
COL2A1P02458 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.65□□□□□ -1.99
COL2A1P02458 SCARNA16.3-201ENST00000516595 184 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 RNU6-798P-201ENST00000516912 103 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 Y_RNA.720-201ENST00000517166 92 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.65□□□□□ -1.99
COL2A1P02458 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.99
COL2A1P02458 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.65□□□□□ -1.99
COL2A1P02458 AC110588.1-201ENST00000559699 137 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
COL2A1P02458 MIR4775-201ENST00000581168 75 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 AL353997.4-201ENST00000586196 166 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.65□□□□□ -1.99
COL2A1P02458 Z82243.1-201ENST00000609432 473 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL2A1P02458 AL078596.1-201ENST00000624856 447 ntBASIC2.65□□□□□ -1.99
COL2A1P02458 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.65□□□□□ -1.99
COL2A1P02458 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.65□□□□□ -1.99
COL2A1P02458 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL2A1P02458 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL2A1P02458 AC010329.2-201ENST00000595195 2737 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 MAPK10-322ENST00000641485 4530 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
COL2A1P02458 AL356292.1-201ENST00000283110 373 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 RNU6-522P-201ENST00000364497 107 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 U8.8-201ENST00000365399 135 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AC074085.1-201ENST00000413598 418 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.64□□□□□ -1.99
COL2A1P02458 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.64□□□□□ -1.99
COL2A1P02458 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.64□□□□□ -1.99
COL2A1P02458 AC137499.1-201ENST00000427602 88 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.64□□□□□ -1.99
COL2A1P02458 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.64□□□□□ -1.99
COL2A1P02458 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.64□□□□□ -1.99
COL2A1P02458 AC245517.4-201ENST00000448601 281 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 MTND5P22-201ENST00000458380 195 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 snoU13.8-201ENST00000458890 104 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 Y_RNA.635-201ENST00000459041 101 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AC087879.1-201ENST00000474343 374 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.64□□□□□ -1.99
COL2A1P02458 AC116562.3-201ENST00000506136 177 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 CCDC34P1-201ENST00000507441 517 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms