Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SET-203ENST00000372688 801 ntTSL 2 BASIC2.61□□□□□ -1.99
CLPTM1O96005 Y_RNA.414-201ENST00000384011 101 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 RNU1-138P-201ENST00000384093 164 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 RNU6-1035P-201ENST00000384477 107 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AL138885.1-201ENST00000405921 675 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 RNU2-3P-201ENST00000410144 191 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AL592148.1-201ENST00000413568 445 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.61□□□□□ -1.99
CLPTM1O96005 USP9YP20-201ENST00000419224 558 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AC099548.1-201ENST00000421443 426 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.61□□□□□ -1.99
CLPTM1O96005 CR769767.1-201ENST00000436337 346 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.61□□□□□ -1.99
CLPTM1O96005 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.61□□□□□ -1.99
CLPTM1O96005 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.61□□□□□ -1.99
CLPTM1O96005 RPS27P27-201ENST00000498779 255 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.61□□□□□ -1.99
CLPTM1O96005 AC046134.1-201ENST00000514454 666 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 SNORA14.1-201ENST00000516113 141 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 RN7SKP272-201ENST00000516988 232 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 SNORA31.21-201ENST00000517180 77 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.61□□□□□ -1.99
CLPTM1O96005 AC087241.2-201ENST00000535801 324 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.61□□□□□ -1.99
CLPTM1O96005 AC026464.5-201ENST00000562497 722 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.61□□□□□ -1.99
CLPTM1O96005 LRRC37A5P-203ENST00000580181 585 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 MIR4742-201ENST00000581069 85 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 MIR3942-201ENST00000585264 109 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 LARP7P1-201ENST00000605576 316 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AC073308.1-201ENST00000623696 305 ntBASIC2.61□□□□□ -1.99
CLPTM1O96005 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.61□□□□□ -1.99
CLPTM1O96005 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLPTM1O96005 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CLPTM1O96005 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CLPTM1O96005 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
CLPTM1O96005 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.6□□□□□ -1.99
CLPTM1O96005 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.6□□□□□ -1.99
CLPTM1O96005 AC022336.2-201ENST00000568966 2538 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 RNU6-884P-201ENST00000363889 107 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 SNORD14B-201ENST00000364533 90 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 SNORD81.2-201ENST00000365153 76 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 Y_RNA.530-201ENST00000384587 101 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 RNU6-1009P-201ENST00000390996 107 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 SNORA40C-201ENST00000391285 128 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 EIF4E2P1-201ENST00000393781 255 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 RNU6-607P-201ENST00000411283 108 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 CYCSP33-201ENST00000414485 327 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 AL353621.1-201ENST00000418219 243 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 SKA2P1-201ENST00000425592 390 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 MTCO3P46-201ENST00000425787 232 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 IFNA20P-201ENST00000436840 528 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.6□□□□□ -1.99
CLPTM1O96005 RPL27AP5-201ENST00000469428 449 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 AC003982.1-202ENST00000469928 248 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 RPS29P20-201ENST00000489592 171 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.6□□□□□ -1.99
CLPTM1O96005 RNU1-103P-201ENST00000516502 125 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 RNA5SP402-201ENST00000517148 110 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 HPRT1P3-201ENST00000539521 576 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.6□□□□□ -1.99
CLPTM1O96005 AC091135.1-201ENST00000585943 307 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 AC005498.1-201ENST00000592125 465 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 MTND4LP5-201ENST00000605152 292 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 AL357078.3-201ENST00000607528 618 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 FAM157A-202ENST00000615155 405 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.6□□□□□ -1.99
CLPTM1O96005 AL031601.2-202ENST00000622650 282 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLPTM1O96005 AC010680.1-201ENST00000590024 3590 ntBASIC2.6□□□□□ -1.99
CLPTM1O96005 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.6□□□□□ -1.99
CLPTM1O96005 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLPTM1O96005 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CLPTM1O96005 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
CLPTM1O96005 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
CLPTM1O96005 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.59□□□□□ -1.99
CLPTM1O96005 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CLPTM1O96005 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.59□□□□□ -1.99
CLPTM1O96005 AC138393.1-203ENST00000327086 343 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 Y_RNA.184-201ENST00000363884 108 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 RNU6-384P-201ENST00000364900 104 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CLPTM1O96005 RNU6-658P-201ENST00000384606 106 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CLPTM1O96005 AL356432.1-201ENST00000405809 419 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 MTND3P8-201ENST00000412909 339 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.59□□□□□ -1.99
CLPTM1O96005 AC098614.2-201ENST00000426040 255 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 AC022018.1-201ENST00000430685 241 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.59□□□□□ -1.99
CLPTM1O96005 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.59□□□□□ -1.99
CLPTM1O96005 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.59□□□□□ -1.99
CLPTM1O96005 snoU13.28-201ENST00000459235 104 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 RNU6-329P-201ENST00000459618 107 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 S100A11P2-201ENST00000467589 312 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.59□□□□□ -1.99
CLPTM1O96005 RPL7P43-201ENST00000478876 753 ntBASIC2.59□□□□□ -1.99
CLPTM1O96005 SRIP1-201ENST00000489235 288 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms