Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RPL27AP8-201ENST00000424277 446 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AL356867.1-201ENST00000429623 299 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 RPL23AP69-201ENST00000431134 458 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AL591704.1-201ENST00000432574 275 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AC125238.1-201ENST00000448842 249 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 RPL12P25-201ENST00000455592 494 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.31□□□□□ -1.88
TOP3BO95985 Y_RNA.638-201ENST00000459374 113 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AC087884.1-201ENST00000469738 328 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AP002884.2-201ENST00000471647 395 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.31□□□□□ -1.88
TOP3BO95985 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.31□□□□□ -1.88
TOP3BO95985 Y_RNA.661-201ENST00000516003 99 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 Y_RNA.670-201ENST00000516255 105 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 RNU1-54P-201ENST00000517181 120 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 RNU6-323P-201ENST00000521915 107 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.31□□□□□ -1.88
TOP3BO95985 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.31□□□□□ -1.88
TOP3BO95985 AC110588.1-201ENST00000559699 137 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AC008269.2-201ENST00000561915 1105 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AC002545.1-201ENST00000592511 181 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AC073539.2-201ENST00000597113 165 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AC018462.2-201ENST00000605375 395 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AC090425.1-201ENST00000610007 140 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 AL359547.2-201ENST00000615810 418 ntBASIC3.31□□□□□ -1.88
TOP3BO95985 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TOP3BO95985 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TOP3BO95985 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TOP3BO95985 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TOP3BO95985 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TOP3BO95985 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TOP3BO95985 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
TOP3BO95985 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TOP3BO95985 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
TOP3BO95985 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TOP3BO95985 Y_RNA.149-201ENST00000363558 117 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 RNY1P14-201ENST00000384426 108 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 Y_RNA.527-201ENST00000384573 102 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 Y_RNA.557-201ENST00000384680 107 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 MIR591-201ENST00000385290 95 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 RNU6-817P-201ENST00000391083 104 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 AL138885.1-201ENST00000405921 675 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 Y_RNA.594-201ENST00000410373 140 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.3□□□□□ -1.88
TOP3BO95985 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.3□□□□□ -1.88
TOP3BO95985 AL731563.1-201ENST00000442202 214 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.3□□□□□ -1.88
TOP3BO95985 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.3□□□□□ -1.88
TOP3BO95985 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.3□□□□□ -1.88
TOP3BO95985 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.3□□□□□ -1.88
TOP3BO95985 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.3□□□□□ -1.88
TOP3BO95985 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.3□□□□□ -1.88
TOP3BO95985 RNU6-927P-201ENST00000516199 100 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 SNORA70.16-201ENST00000516390 95 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 SCARNA15.2-201ENST00000516409 127 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.3□□□□□ -1.88
TOP3BO95985 AC006157.1-201ENST00000611750 366 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 AL162373.1-201ENST00000620433 407 ntBASIC3.3□□□□□ -1.88
TOP3BO95985 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TOP3BO95985 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
TOP3BO95985 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.29□□□□□ -1.88
TOP3BO95985 AC005183.1-201ENST00000603687 1979 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 RNU6-95P-201ENST00000384697 107 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 RPS4XP7-201ENST00000406274 780 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 RN7SKP111-201ENST00000410349 271 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 RNA5SP229-201ENST00000410809 99 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 HMGB3P2-201ENST00000411913 584 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.29□□□□□ -1.88
TOP3BO95985 HIGD1AP11-201ENST00000438361 280 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 RPL31P60-201ENST00000478450 367 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 AC026801.1-201ENST00000497178 464 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.29□□□□□ -1.88
TOP3BO95985 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 CYCSP27-201ENST00000527643 293 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.29□□□□□ -1.88
TOP3BO95985 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.29□□□□□ -1.88
TOP3BO95985 SYF2P1-201ENST00000550658 413 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 AL355598.1-201ENST00000604169 202 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 AC034102.8-201ENST00000615146 484 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 Z69720.2-201ENST00000624755 279 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TOP3BO95985 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.29□□□□□ -1.88
TOP3BO95985 Z83843.1-201ENST00000604070 3685 ntBASIC3.29□□□□□ -1.88
TOP3BO95985 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TOP3BO95985 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.29□□□□□ -1.88
TOP3BO95985 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.29□□□□□ -1.88
TOP3BO95985 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TOP3BO95985 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TOP3BO95985 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.28□□□□□ -1.88
TOP3BO95985 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
TOP3BO95985 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
TOP3BO95985 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TOP3BO95985 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.28□□□□□ -1.88
TOP3BO95985 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.28□□□□□ -1.88
TOP3BO95985 Y_RNA.47-201ENST00000362697 108 ntBASIC3.28□□□□□ -1.88
TOP3BO95985 Y_RNA.496-201ENST00000384444 101 ntBASIC3.28□□□□□ -1.88
TOP3BO95985 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.28□□□□□ -1.88
TOP3BO95985 AC114482.1-201ENST00000418010 247 ntBASIC3.28□□□□□ -1.88
TOP3BO95985 NDUFB4P7-201ENST00000423198 363 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms