Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC020550.1-201ENST00000447385 163 ntBASIC0.32□□□□□ -2.36
SIX6O95475 RPL39P6-201ENST00000448289 150 ntBASIC0.32□□□□□ -2.36
SIX6O95475 AC108059.3-201ENST00000456388 214 ntBASIC0.32□□□□□ -2.36
SIX6O95475 RPL30P6-201ENST00000475925 342 ntBASIC0.32□□□□□ -2.36
SIX6O95475 COX6CP6-201ENST00000490840 228 ntBASIC0.32□□□□□ -2.36
SIX6O95475 AC091860.1-201ENST00000505723 432 ntBASIC0.32□□□□□ -2.36
SIX6O95475 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
SIX6O95475 AF131216.2-201ENST00000512316 564 ntBASIC0.32□□□□□ -2.36
SIX6O95475 AC074344.1-201ENST00000512823 224 ntBASIC0.32□□□□□ -2.36
SIX6O95475 SNORA3.4-201ENST00000515969 96 ntBASIC0.32□□□□□ -2.36
SIX6O95475 RNA5SP458-201ENST00000516188 119 ntBASIC0.32□□□□□ -2.36
SIX6O95475 RNU4-54P-201ENST00000516428 129 ntBASIC0.32□□□□□ -2.36
SIX6O95475 RNA5SP121-201ENST00000516537 101 ntBASIC0.32□□□□□ -2.36
SIX6O95475 SNORA70.22-201ENST00000517160 124 ntBASIC0.32□□□□□ -2.36
SIX6O95475 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.32□□□□□ -2.36
SIX6O95475 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.32□□□□□ -2.36
SIX6O95475 AC109446.2-201ENST00000567872 497 ntBASIC0.32□□□□□ -2.36
SIX6O95475 MIR4782-201ENST00000577987 79 ntBASIC0.32□□□□□ -2.36
SIX6O95475 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.32□□□□□ -2.36
SIX6O95475 MIR3664-201ENST00000579074 99 ntBASIC0.32□□□□□ -2.36
SIX6O95475 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.32□□□□□ -2.36
SIX6O95475 AC016727.1-205ENST00000605437 569 ntBASIC0.32□□□□□ -2.36
SIX6O95475 uc_338.15-201ENST00000615470 191 ntBASIC0.32□□□□□ -2.36
SIX6O95475 AC009268.2-201ENST00000621925 457 ntBASIC0.32□□□□□ -2.36
SIX6O95475 AC093648.1-201ENST00000623546 606 ntBASIC0.32□□□□□ -2.36
SIX6O95475 AC120349.3-201ENST00000624377 529 ntBASIC0.32□□□□□ -2.36
SIX6O95475 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SIX6O95475 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
SIX6O95475 RNA5SP99-201ENST00000364020 114 ntBASIC0.31□□□□□ -2.36
SIX6O95475 SNORD114-6-201ENST00000364393 72 ntBASIC0.31□□□□□ -2.36
SIX6O95475 RNU6-754P-201ENST00000391166 107 ntBASIC0.31□□□□□ -2.36
SIX6O95475 AL590084.2-201ENST00000401481 382 ntBASIC0.31□□□□□ -2.36
SIX6O95475 AL139397.2-201ENST00000404529 772 ntBASIC0.31□□□□□ -2.36
SIX6O95475 RPS3AP1-201ENST00000413190 320 ntBASIC0.31□□□□□ -2.36
SIX6O95475 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.31□□□□□ -2.36
SIX6O95475 AL592045.1-201ENST00000429867 352 ntBASIC0.31□□□□□ -2.36
SIX6O95475 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.31□□□□□ -2.36
SIX6O95475 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.31□□□□□ -2.36
SIX6O95475 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.31□□□□□ -2.36
SIX6O95475 MTND1P16-201ENST00000465177 898 ntBASIC0.31□□□□□ -2.36
SIX6O95475 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.31□□□□□ -2.36
SIX6O95475 TMEM251P1-201ENST00000503717 318 ntBASIC0.31□□□□□ -2.36
SIX6O95475 AC110760.3-202ENST00000515177 371 ntBASIC0.31□□□□□ -2.36
SIX6O95475 RNU6-390P-201ENST00000516259 103 ntBASIC0.31□□□□□ -2.36
SIX6O95475 CYP4A27P-201ENST00000567218 190 ntBASIC0.31□□□□□ -2.36
SIX6O95475 AC105129.3-201ENST00000605455 485 ntBASIC0.31□□□□□ -2.36
SIX6O95475 AL589994.2-201ENST00000621124 579 ntBASIC0.31□□□□□ -2.36
SIX6O95475 AC132825.7-201ENST00000638744 335 ntBASIC0.31□□□□□ -2.36
SIX6O95475 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
SIX6O95475 RNA5SP361-201ENST00000362686 118 ntBASIC0.3□□□□□ -2.36
SIX6O95475 RNU6-288P-201ENST00000363690 104 ntBASIC0.3□□□□□ -2.36
SIX6O95475 RNU6-512P-201ENST00000364438 103 ntBASIC0.3□□□□□ -2.36
SIX6O95475 MIR520A-201ENST00000384862 85 ntBASIC0.3□□□□□ -2.36
SIX6O95475 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.3□□□□□ -2.36
SIX6O95475 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.3□□□□□ -2.36
SIX6O95475 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.3□□□□□ -2.36
SIX6O95475 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.3□□□□□ -2.36
SIX6O95475 MTCO2P5-201ENST00000422621 426 ntBASIC0.3□□□□□ -2.36
SIX6O95475 MTND4P24-201ENST00000424002 397 ntBASIC0.3□□□□□ -2.36
SIX6O95475 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.3□□□□□ -2.36
SIX6O95475 CBX3P6-201ENST00000430257 527 ntBASIC0.3□□□□□ -2.36
SIX6O95475 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.3□□□□□ -2.36
SIX6O95475 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.3□□□□□ -2.36
SIX6O95475 AC034244.1-201ENST00000507687 207 ntBASIC0.3□□□□□ -2.36
SIX6O95475 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.3□□□□□ -2.36
SIX6O95475 RNU6-229P-201ENST00000516614 102 ntBASIC0.3□□□□□ -2.36
SIX6O95475 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.3□□□□□ -2.36
SIX6O95475 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.3□□□□□ -2.36
SIX6O95475 HSPE1P4-201ENST00000550617 308 ntBASIC0.3□□□□□ -2.36
SIX6O95475 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.3□□□□□ -2.36
SIX6O95475 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.3□□□□□ -2.36
SIX6O95475 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.3□□□□□ -2.36
SIX6O95475 AL359821.1-201ENST00000605519 182 ntBASIC0.3□□□□□ -2.36
SIX6O95475 AC104465.1-201ENST00000611365 139 ntBASIC0.3□□□□□ -2.36
SIX6O95475 AC008759.3-201ENST00000613300 508 ntBASIC0.3□□□□□ -2.36
SIX6O95475 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.3□□□□□ -2.36
SIX6O95475 MIR1248-201ENST00000629190 106 ntBASIC0.3□□□□□ -2.36
SIX6O95475 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.3□□□□□ -2.36
SIX6O95475 AL161781.1-201ENST00000354277 403 ntBASIC0.29□□□□□ -2.36
SIX6O95475 RNU6-529P-201ENST00000363383 104 ntBASIC0.29□□□□□ -2.36
SIX6O95475 U3.8-201ENST00000363675 217 ntBASIC0.29□□□□□ -2.36
SIX6O95475 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
SIX6O95475 MIR217-201ENST00000384817 110 ntBASIC0.29□□□□□ -2.36
SIX6O95475 SNORD65C-201ENST00000390962 71 ntBASIC0.29□□□□□ -2.36
SIX6O95475 RNU2-7P-201ENST00000410794 178 ntBASIC0.29□□□□□ -2.36
SIX6O95475 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.29□□□□□ -2.36
SIX6O95475 CETN4P-201ENST00000432407 469 ntBASIC0.29□□□□□ -2.36
SIX6O95475 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.29□□□□□ -2.36
SIX6O95475 GTF2IP13-201ENST00000438487 386 ntBASIC0.29□□□□□ -2.36
SIX6O95475 MTATP6P30-201ENST00000443540 664 ntBASIC0.29□□□□□ -2.36
SIX6O95475 RPS27AP8-201ENST00000452665 445 ntBASIC0.29□□□□□ -2.36
SIX6O95475 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.29□□□□□ -2.36
SIX6O95475 MTND2P6-201ENST00000455337 1030 ntBASIC0.29□□□□□ -2.36
SIX6O95475 BTF3P15-201ENST00000455606 336 ntBASIC0.29□□□□□ -2.36
SIX6O95475 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.29□□□□□ -2.36
SIX6O95475 RNU5A-4P-201ENST00000516588 111 ntBASIC0.29□□□□□ -2.36
SIX6O95475 RNA5SP384-201ENST00000516615 116 ntBASIC0.29□□□□□ -2.36
SIX6O95475 RNA5SP168-201ENST00000516642 112 ntBASIC0.29□□□□□ -2.36
SIX6O95475 RNA5SP437-201ENST00000517249 129 ntBASIC0.29□□□□□ -2.36
SIX6O95475 AP000889.1-201ENST00000530968 660 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms