Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.47□□□□□ -2.01
SIX3O95343 AC073539.2-201ENST00000597113 165 ntBASIC2.47□□□□□ -2.01
SIX3O95343 AC025449.1-201ENST00000603896 529 ntBASIC2.47□□□□□ -2.01
SIX3O95343 AL138963.2-201ENST00000605137 226 ntBASIC2.47□□□□□ -2.01
SIX3O95343 AC007684.1-201ENST00000609671 477 ntBASIC2.47□□□□□ -2.01
SIX3O95343 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.47□□□□□ -2.01
SIX3O95343 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.47□□□□□ -2.01
SIX3O95343 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.47□□□□□ -2.01
SIX3O95343 ZNF680P1-201ENST00000436625 1469 ntBASIC2.46□□□□□ -2.02
SIX3O95343 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SIX3O95343 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SIX3O95343 SNORD56.1-201ENST00000362913 68 ntBASIC2.46□□□□□ -2.02
SIX3O95343 RNA5SP99-201ENST00000364020 114 ntBASIC2.46□□□□□ -2.02
SIX3O95343 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SIX3O95343 RNU6-843P-201ENST00000384454 104 ntBASIC2.46□□□□□ -2.02
SIX3O95343 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.46□□□□□ -2.02
SIX3O95343 AL162578.1-201ENST00000406202 378 ntBASIC2.46□□□□□ -2.02
SIX3O95343 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.46□□□□□ -2.02
SIX3O95343 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.46□□□□□ -2.02
SIX3O95343 AL031667.1-201ENST00000440222 725 ntBASIC2.46□□□□□ -2.02
SIX3O95343 MTND2P22-201ENST00000444325 1033 ntBASIC2.46□□□□□ -2.02
SIX3O95343 SNRPFP3-201ENST00000457792 225 ntBASIC2.46□□□□□ -2.02
SIX3O95343 RNU7-63P-201ENST00000459054 62 ntBASIC2.46□□□□□ -2.02
SIX3O95343 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.46□□□□□ -2.02
SIX3O95343 ANXA2P1-201ENST00000505539 926 ntBASIC2.46□□□□□ -2.02
SIX3O95343 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.46□□□□□ -2.02
SIX3O95343 AP005902.1-201ENST00000521358 186 ntBASIC2.46□□□□□ -2.02
SIX3O95343 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SIX3O95343 IGKV3-31-201ENST00000523109 329 ntBASIC2.46□□□□□ -2.02
SIX3O95343 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.46□□□□□ -2.02
SIX3O95343 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.46□□□□□ -2.02
SIX3O95343 AP001486.3-201ENST00000615334 372 ntBASIC2.46□□□□□ -2.02
SIX3O95343 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SIX3O95343 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SIX3O95343 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SIX3O95343 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SIX3O95343 HAUS6P2-201ENST00000433254 2404 ntBASIC2.46□□□□□ -2.02
SIX3O95343 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.45□□□□□ -2.02
SIX3O95343 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SIX3O95343 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SIX3O95343 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SIX3O95343 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SIX3O95343 RNU6-212P-201ENST00000362642 104 ntBASIC2.45□□□□□ -2.02
SIX3O95343 RNU6-859P-201ENST00000362728 107 ntBASIC2.45□□□□□ -2.02
SIX3O95343 RNU6-393P-201ENST00000384475 107 ntBASIC2.45□□□□□ -2.02
SIX3O95343 RNU1-57P-201ENST00000384491 166 ntBASIC2.45□□□□□ -2.02
SIX3O95343 GSTA9P-201ENST00000406231 611 ntBASIC2.45□□□□□ -2.02
SIX3O95343 RNU6-1140P-201ENST00000410517 106 ntBASIC2.45□□□□□ -2.02
SIX3O95343 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.45□□□□□ -2.02
SIX3O95343 AC063976.3-201ENST00000426849 329 ntBASIC2.45□□□□□ -2.02
SIX3O95343 AL591043.1-201ENST00000432461 424 ntBASIC2.45□□□□□ -2.02
SIX3O95343 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.45□□□□□ -2.02
SIX3O95343 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.45□□□□□ -2.02
SIX3O95343 AC096725.1-201ENST00000514266 313 ntBASIC2.45□□□□□ -2.02
SIX3O95343 SNORA43.2-201ENST00000516652 128 ntBASIC2.45□□□□□ -2.02
SIX3O95343 CR383656.8-201ENST00000549046 145 ntBASIC2.45□□□□□ -2.02
SIX3O95343 AC078814.3-201ENST00000553036 491 ntBASIC2.45□□□□□ -2.02
SIX3O95343 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.45□□□□□ -2.02
SIX3O95343 NBR2-204ENST00000587322 63 ntBASIC2.45□□□□□ -2.02
SIX3O95343 Z82243.1-201ENST00000609432 473 ntBASIC2.45□□□□□ -2.02
SIX3O95343 AC008121.3-201ENST00000618726 433 ntBASIC2.45□□□□□ -2.02
SIX3O95343 AL031601.2-202ENST00000622650 282 ntBASIC2.45□□□□□ -2.02
SIX3O95343 AC010297.1-201ENST00000623948 149 ntBASIC2.45□□□□□ -2.02
SIX3O95343 AC090517.3-201ENST00000625170 141 ntBASIC2.45□□□□□ -2.02
SIX3O95343 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SIX3O95343 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.45□□□□□ -2.02
SIX3O95343 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.45□□□□□ -2.02
SIX3O95343 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SIX3O95343 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SIX3O95343 RNU6-942P-201ENST00000363002 107 ntBASIC2.44□□□□□ -2.02
SIX3O95343 SNORD116-1-201ENST00000384335 95 ntBASIC2.44□□□□□ -2.02
SIX3O95343 RNU6-434P-201ENST00000384376 107 ntBASIC2.44□□□□□ -2.02
SIX3O95343 MIR489-201ENST00000384923 84 ntBASIC2.44□□□□□ -2.02
SIX3O95343 MIR524-201ENST00000385242 87 ntBASIC2.44□□□□□ -2.02
SIX3O95343 AL591416.1-201ENST00000404015 867 ntBASIC2.44□□□□□ -2.02
SIX3O95343 RNU2-29P-201ENST00000410423 189 ntBASIC2.44□□□□□ -2.02
SIX3O95343 RNU6-1245P-201ENST00000411130 106 ntBASIC2.44□□□□□ -2.02
SIX3O95343 CDK8P2-201ENST00000415020 547 ntBASIC2.44□□□□□ -2.02
SIX3O95343 ARL5AP4-201ENST00000430731 512 ntBASIC2.44□□□□□ -2.02
SIX3O95343 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.44□□□□□ -2.02
SIX3O95343 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.44□□□□□ -2.02
SIX3O95343 AC027673.1-201ENST00000456245 405 ntBASIC2.44□□□□□ -2.02
SIX3O95343 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.44□□□□□ -2.02
SIX3O95343 DYNLL1P5-201ENST00000467158 270 ntBASIC2.44□□□□□ -2.02
SIX3O95343 AF213884.2-201ENST00000510417 903 ntBASIC2.44□□□□□ -2.02
SIX3O95343 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.44□□□□□ -2.02
SIX3O95343 AC008549.1-201ENST00000512900 643 ntBASIC2.44□□□□□ -2.02
SIX3O95343 AC105417.1-201ENST00000514691 285 ntBASIC2.44□□□□□ -2.02
SIX3O95343 LRRC34P2-201ENST00000514850 553 ntBASIC2.44□□□□□ -2.02
SIX3O95343 AP003392.2-201ENST00000527269 208 ntBASIC2.44□□□□□ -2.02
SIX3O95343 CBX3P7-201ENST00000532876 502 ntBASIC2.44□□□□□ -2.02
SIX3O95343 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.44□□□□□ -2.02
SIX3O95343 AC004223.2-201ENST00000590309 544 ntBASIC2.44□□□□□ -2.02
SIX3O95343 AC060766.3-201ENST00000591442 263 ntBASIC2.44□□□□□ -2.02
SIX3O95343 RPL30P11-203ENST00000598995 310 ntBASIC2.44□□□□□ -2.02
SIX3O95343 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.44□□□□□ -2.02
SIX3O95343 uc_338.15-201ENST00000615470 191 ntBASIC2.44□□□□□ -2.02
SIX3O95343 AC024581.2-201ENST00000619986 252 ntBASIC2.44□□□□□ -2.02
SIX3O95343 AC241585.2-209ENST00000638217 143 ntBASIC2.44□□□□□ -2.02
SIX3O95343 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms