Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
LTN1O94822 RNY4P3-201ENST00000365254 95 ntBASIC0.16□□□□□ -2.38
LTN1O94822 RNU6-45P-201ENST00000384471 107 ntBASIC0.16□□□□□ -2.38
LTN1O94822 RPS26P5-201ENST00000418544 335 ntBASIC0.16□□□□□ -2.38
LTN1O94822 AC067940.1-201ENST00000458411 300 ntBASIC0.16□□□□□ -2.38
LTN1O94822 MEMO1P3-201ENST00000459811 302 ntBASIC0.16□□□□□ -2.38
LTN1O94822 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.16□□□□□ -2.38
LTN1O94822 AC004775.1-201ENST00000607389 753 ntBASIC0.16□□□□□ -2.38
LTN1O94822 RNU5A-1-201ENST00000362698 116 ntBASIC0.15□□□□□ -2.39
LTN1O94822 RNU6-167P-201ENST00000384292 106 ntBASIC0.15□□□□□ -2.39
LTN1O94822 AC127391.1-201ENST00000411737 98 ntBASIC0.15□□□□□ -2.39
LTN1O94822 AL590383.1-201ENST00000428602 75 ntBASIC0.15□□□□□ -2.39
LTN1O94822 FO393419.3-201ENST00000428741 282 ntBASIC0.15□□□□□ -2.39
LTN1O94822 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.15□□□□□ -2.39
LTN1O94822 RPL36AP53-201ENST00000432891 316 ntBASIC0.15□□□□□ -2.39
LTN1O94822 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.15□□□□□ -2.39
LTN1O94822 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.15□□□□□ -2.39
LTN1O94822 AC022483.1-201ENST00000514020 567 ntBASIC0.15□□□□□ -2.39
LTN1O94822 AC087897.1-201ENST00000550134 156 ntBASIC0.15□□□□□ -2.39
LTN1O94822 AC090578.1-201ENST00000604955 591 ntBASIC0.15□□□□□ -2.39
LTN1O94822 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.15□□□□□ -2.39
LTN1O94822 FARSBP1-201ENST00000435808 1778 ntBASIC0.14□□□□□ -2.39
LTN1O94822 RNU2-48P-201ENST00000410694 191 ntBASIC0.14□□□□□ -2.39
LTN1O94822 AL161935.2-201ENST00000414627 60 ntBASIC0.14□□□□□ -2.39
LTN1O94822 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.14□□□□□ -2.39
LTN1O94822 AC009509.4-201ENST00000619202 509 ntBASIC0.14□□□□□ -2.39
LTN1O94822 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.14□□□□□ -2.39
LTN1O94822 AC090625.1-201ENST00000357130 210 ntBASIC0.14□□□□□ -2.39
LTN1O94822 SNORD51-201ENST00000384320 80 ntBASIC0.14□□□□□ -2.39
LTN1O94822 MIR200A-201ENST00000384875 90 ntBASIC0.14□□□□□ -2.39
LTN1O94822 MIR605-201ENST00000385078 83 ntBASIC0.14□□□□□ -2.39
LTN1O94822 AC119751.3-201ENST00000399720 670 ntBASIC0.14□□□□□ -2.39
LTN1O94822 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.14□□□□□ -2.39
LTN1O94822 snoU13.19-201ENST00000459148 104 ntBASIC0.14□□□□□ -2.39
LTN1O94822 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.14□□□□□ -2.39
LTN1O94822 AL512310.8-201ENST00000550183 120 ntBASIC0.14□□□□□ -2.39
LTN1O94822 BNIP3P27-201ENST00000599991 412 ntBASIC0.14□□□□□ -2.39
LTN1O94822 AL031176.1-201ENST00000604554 466 ntBASIC0.14□□□□□ -2.39
LTN1O94822 AC008993.2-201ENST00000631744 806 ntBASIC0.14□□□□□ -2.39
LTN1O94822 GDI2P1-201ENST00000429312 1336 ntBASIC0.13□□□□□ -2.39
LTN1O94822 RNU6-1151P-201ENST00000384684 107 ntBASIC0.13□□□□□ -2.39
LTN1O94822 RNU6-700P-201ENST00000391043 107 ntBASIC0.13□□□□□ -2.39
LTN1O94822 RPL26P27-201ENST00000414397 437 ntBASIC0.13□□□□□ -2.39
LTN1O94822 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.13□□□□□ -2.39
LTN1O94822 AC112771.1-201ENST00000463581 102 ntBASIC0.13□□□□□ -2.39
LTN1O94822 SCARNA15.2-201ENST00000516409 127 ntBASIC0.13□□□□□ -2.39
LTN1O94822 AC023158.1-201ENST00000561632 1025 ntBASIC0.13□□□□□ -2.39
LTN1O94822 AC012213.3-201ENST00000577199 777 ntBASIC0.13□□□□□ -2.39
LTN1O94822 AC022432.1-201ENST00000595739 310 ntBASIC0.13□□□□□ -2.39
LTN1O94822 AC135803.1-201ENST00000608748 565 ntBASIC0.13□□□□□ -2.39
LTN1O94822 AC123767.1-202ENST00000620407 817 ntBASIC0.13□□□□□ -2.39
LTN1O94822 AC007490.1-201ENST00000624321 703 ntBASIC0.13□□□□□ -2.39
LTN1O94822 MTND1P37-201ENST00000636562 264 ntBASIC0.13□□□□□ -2.39
LTN1O94822 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.13□□□□□ -2.39
LTN1O94822 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.13□□□□□ -2.39
LTN1O94822 SNORD82-201ENST00000365530 70 ntBASIC0.12□□□□□ -2.39
LTN1O94822 RNU2-43P-201ENST00000410306 190 ntBASIC0.12□□□□□ -2.39
LTN1O94822 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.12□□□□□ -2.39
LTN1O94822 RPL26P26-201ENST00000480251 434 ntBASIC0.12□□□□□ -2.39
LTN1O94822 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.12□□□□□ -2.39
LTN1O94822 RN7SKP88-201ENST00000516847 250 ntBASIC0.12□□□□□ -2.39
LTN1O94822 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.12□□□□□ -2.39
LTN1O94822 AL022067.1-201ENST00000602426 454 ntBASIC0.12□□□□□ -2.39
LTN1O94822 7SK.8-201ENST00000612110 250 ntBASIC0.12□□□□□ -2.39
LTN1O94822 7SK.11-201ENST00000615477 250 ntBASIC0.12□□□□□ -2.39
LTN1O94822 7SK.13-201ENST00000622040 250 ntBASIC0.12□□□□□ -2.39
LTN1O94822 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
LTN1O94822 MIR302D-201ENST00000362275 68 ntBASIC0.11□□□□□ -2.39
LTN1O94822 SNORD14D-201ENST00000384390 87 ntBASIC0.11□□□□□ -2.39
LTN1O94822 NDUFS5P4-201ENST00000412983 318 ntBASIC0.11□□□□□ -2.39
LTN1O94822 AL441985.1-201ENST00000457727 251 ntBASIC0.11□□□□□ -2.39
LTN1O94822 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.11□□□□□ -2.39
LTN1O94822 PTP4A1P4-201ENST00000512479 322 ntBASIC0.11□□□□□ -2.39
LTN1O94822 AL162730.1-201ENST00000605734 292 ntBASIC0.11□□□□□ -2.39
LTN1O94822 AC006001.4-201ENST00000622243 395 ntBASIC0.11□□□□□ -2.39
LTN1O94822 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.11□□□□□ -2.39
LTN1O94822 RNA5SP361-201ENST00000362686 118 ntBASIC0.11□□□□□ -2.39
LTN1O94822 RNU4-12P-201ENST00000365233 139 ntBASIC0.11□□□□□ -2.39
LTN1O94822 RNU6-741P-201ENST00000383889 107 ntBASIC0.11□□□□□ -2.39
LTN1O94822 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.11□□□□□ -2.39
LTN1O94822 AC092423.1-201ENST00000430165 186 ntBASIC0.11□□□□□ -2.39
LTN1O94822 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.11□□□□□ -2.39
LTN1O94822 RNA5SP269-201ENST00000459032 137 ntBASIC0.11□□□□□ -2.39
LTN1O94822 RPL7P43-201ENST00000478876 753 ntBASIC0.11□□□□□ -2.39
LTN1O94822 AC105758.1-201ENST00000506038 399 ntBASIC0.11□□□□□ -2.39
LTN1O94822 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.11□□□□□ -2.39
LTN1O94822 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.11□□□□□ -2.39
LTN1O94822 ROCK1P1-201ENST00000573767 549 ntBASIC0.11□□□□□ -2.39
LTN1O94822 AP003465.2-201ENST00000602571 373 ntBASIC0.11□□□□□ -2.39
LTN1O94822 AC069304.2-201ENST00000605154 435 ntBASIC0.11□□□□□ -2.39
LTN1O94822 AC009237.15-201ENST00000610252 501 ntBASIC0.11□□□□□ -2.39
LTN1O94822 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.1□□□□□ -2.39
LTN1O94822 MIR514A1-201ENST00000385133 98 ntBASIC0.1□□□□□ -2.39
LTN1O94822 RNU2-7P-201ENST00000410794 178 ntBASIC0.1□□□□□ -2.39
LTN1O94822 NANOGP2-201ENST00000435391 727 ntBASIC0.1□□□□□ -2.39
LTN1O94822 AL353706.1-201ENST00000436728 494 ntBASIC0.1□□□□□ -2.39
LTN1O94822 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
LTN1O94822 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.1□□□□□ -2.39
LTN1O94822 SNORA14.1-201ENST00000516113 141 ntBASIC0.1□□□□□ -2.39
LTN1O94822 SNORA70.22-201ENST00000517160 124 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms