Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SNORA75B-201ENST00000384053 137 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 Y_RNA.578-201ENST00000390903 88 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 RNU6-360P-201ENST00000390944 104 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 MRPL35P1-201ENST00000404272 572 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 RNA5SP390-201ENST00000410191 113 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 RPL21P111-201ENST00000418453 477 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.84□□□□□ -2.27
PDE6DO43924 AL365338.1-201ENST00000422282 858 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.84□□□□□ -2.27
PDE6DO43924 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.84□□□□□ -2.27
PDE6DO43924 C8orf59P1-201ENST00000429930 303 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 AL591212.2-201ENST00000433923 257 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 MTCO2P25-201ENST00000447065 681 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 MTCO1P27-201ENST00000448269 226 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 AL583843.1-201ENST00000456070 346 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 RNU6-333P-201ENST00000459117 107 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 RPL9P9-202ENST00000466501 579 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 RPS29P21-201ENST00000496272 170 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.84□□□□□ -2.27
PDE6DO43924 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.84□□□□□ -2.27
PDE6DO43924 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.84□□□□□ -2.27
PDE6DO43924 CYP3A52P-201ENST00000563326 91 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.84□□□□□ -2.27
PDE6DO43924 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.84□□□□□ -2.27
PDE6DO43924 AC006270.3-201ENST00000605967 1036 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 AC004492.1-201ENST00000607036 742 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 AC022893.3-201ENST00000607665 437 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 AC063943.3-201ENST00000615562 356 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 AC120349.3-201ENST00000624377 529 ntBASIC0.84□□□□□ -2.27
PDE6DO43924 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
PDE6DO43924 AC002543.1-201ENST00000299783 1954 ntBASIC0.84□□□□□ -2.28
PDE6DO43924 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.84□□□□□ -2.28
PDE6DO43924 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
PDE6DO43924 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
PDE6DO43924 AL589826.1-201ENST00000340697 249 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 RNU1-22P-201ENST00000363334 158 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 RNU6-395P-201ENST00000365662 106 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 RNU6-72P-201ENST00000384285 79 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 SNORA40.2-201ENST00000390847 128 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 SNORA26.9-201ENST00000391322 122 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 RPL23AP32-201ENST00000395315 459 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.83□□□□□ -2.28
PDE6DO43924 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
PDE6DO43924 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.83□□□□□ -2.28
PDE6DO43924 FTH1P12-201ENST00000432137 551 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 HSPE1P9-201ENST00000440046 311 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 AL022238.1-201ENST00000442557 355 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.83□□□□□ -2.28
PDE6DO43924 AC108059.3-201ENST00000456388 214 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 RNU1-131P-201ENST00000458943 161 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 MTND1P16-201ENST00000465177 898 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 RPS23P4-201ENST00000487908 423 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 RPL36AP21-201ENST00000490372 323 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 AC069306.1-201ENST00000507006 843 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 AC009646.1-201ENST00000510455 318 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 SNORA3.4-201ENST00000515969 96 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 RNU6-1028P-201ENST00000517164 93 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.83□□□□□ -2.28
PDE6DO43924 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.83□□□□□ -2.28
PDE6DO43924 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.83□□□□□ -2.28
PDE6DO43924 AC005776.1-201ENST00000603164 290 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 AC112220.3-201ENST00000605502 502 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 AP000654.2-201ENST00000605633 586 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 AC025754.2-201ENST00000606491 432 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 AL365204.3-201ENST00000612448 685 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.83□□□□□ -2.28
PDE6DO43924 AC012676.2-201ENST00000619258 186 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 AL589994.2-201ENST00000621124 579 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 AC068880.4-201ENST00000623082 495 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.83□□□□□ -2.28
PDE6DO43924 AC095038.3-201ENST00000634439 195 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
PDE6DO43924 LINC02555-201ENST00000563933 1951 ntBASIC0.83□□□□□ -2.28
PDE6DO43924 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
PDE6DO43924 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
PDE6DO43924 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.82□□□□□ -2.28
PDE6DO43924 Y_RNA.255-201ENST00000364581 97 ntBASIC0.82□□□□□ -2.28
PDE6DO43924 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.82□□□□□ -2.28
PDE6DO43924 Y_RNA.510-201ENST00000384511 114 ntBASIC0.82□□□□□ -2.28
PDE6DO43924 SNORD116-20-201ENST00000384529 92 ntBASIC0.82□□□□□ -2.28
PDE6DO43924 RNU6-1222P-201ENST00000384615 107 ntBASIC0.82□□□□□ -2.28
PDE6DO43924 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.82□□□□□ -2.28
PDE6DO43924 AL357139.1-201ENST00000407792 426 ntBASIC0.82□□□□□ -2.28
PDE6DO43924 MIR320C1-201ENST00000408566 88 ntBASIC0.82□□□□□ -2.28
PDE6DO43924 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.82□□□□□ -2.28
PDE6DO43924 USP9YP21-201ENST00000420603 432 ntBASIC0.82□□□□□ -2.28
PDE6DO43924 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.82□□□□□ -2.28
PDE6DO43924 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.82□□□□□ -2.28
PDE6DO43924 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.82□□□□□ -2.28
PDE6DO43924 SUMO2P5-201ENST00000506790 245 ntBASIC0.82□□□□□ -2.28
PDE6DO43924 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.82□□□□□ -2.28
PDE6DO43924 AP003465.2-201ENST00000602571 373 ntBASIC0.82□□□□□ -2.28
PDE6DO43924 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
PDE6DO43924 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
PDE6DO43924 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.81□□□□□ -2.28
PDE6DO43924 RNU6-1065P-201ENST00000384513 106 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 UBE2V1P2-201ENST00000397758 440 ntBASIC0.81□□□□□ -2.28
PDE6DO43924 MIR1305-201ENST00000408300 86 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms