Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1AO00322 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK1AO00322 AP003122.4-201ENST00000530980 758 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.43□□□□□ -2.18
UPK1AO00322 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
UPK1AO00322 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1AO00322 CR383656.8-201ENST00000549046 145 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1AO00322 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1AO00322 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1AO00322 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1AO00322 MIR3118-1-201ENST00000581787 76 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 MIR548AC-201ENST00000585049 88 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 AP000811.1-201ENST00000603803 651 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 AL022154.1-201ENST00000604698 785 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 AC126118.1-201ENST00000607744 628 ntBASIC1.43□□□□□ -2.18
UPK1AO00322 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1AO00322 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UPK1AO00322 SNORD56.2-201ENST00000363242 71 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 U8.3-201ENST00000363321 132 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 RNU6-546P-201ENST00000383991 107 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 RNU6-533P-201ENST00000384144 107 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 SNORD116-20-201ENST00000384529 92 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 MIR1323-201ENST00000408090 73 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 SSR1P2-201ENST00000415208 787 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK1AO00322 AC244636.1-201ENST00000421152 228 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 TOMM20P4-201ENST00000427861 435 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK1AO00322 MTND2P39-201ENST00000457230 764 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 AC006026.2-201ENST00000457376 180 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 AP000797.1-201ENST00000478870 387 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.42□□□□□ -2.18
UPK1AO00322 AC091965.2-201ENST00000512324 613 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 RNU6-311P-201ENST00000516224 102 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK1AO00322 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK1AO00322 ZNF519P3-201ENST00000557158 1032 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK1AO00322 MTND1P8-201ENST00000571424 950 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK1AO00322 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK1AO00322 AC005014.3-201ENST00000605985 190 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 AP002360.4-201ENST00000606980 481 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK1AO00322 AC108479.2-201ENST00000617314 601 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 SCARNA4-202ENST00000625402 129 ntBASIC1.42□□□□□ -2.18
UPK1AO00322 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UPK1AO00322 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.41□□□□□ -2.18
UPK1AO00322 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
UPK1AO00322 RNU6-212P-201ENST00000362642 104 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 SNORD3E-201ENST00000362899 217 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 RNU6-529P-201ENST00000363383 104 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 MRPL42P2-201ENST00000403169 426 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 SNORA11.2-201ENST00000408318 127 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK1AO00322 NDUFB1P2-201ENST00000449477 176 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK1AO00322 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK1AO00322 AC034244.1-201ENST00000507687 207 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 AF131216.2-201ENST00000512316 564 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 AC112206.3-201ENST00000514578 389 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK1AO00322 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.41□□□□□ -2.18
UPK1AO00322 RNA5SP337-201ENST00000517007 109 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 RNU6-548P-201ENST00000517083 115 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 AP003392.2-201ENST00000527269 208 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 AP005639.2-201ENST00000527592 928 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 CYCSP27-201ENST00000527643 293 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK1AO00322 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.41□□□□□ -2.18
UPK1AO00322 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.41□□□□□ -2.18
UPK1AO00322 MIR4999-201ENST00000585029 91 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 DEFB131E-202ENST00000602581 683 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 AL353778.1-201ENST00000603149 408 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 AL138889.2-201ENST00000603883 242 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 AL359999.1-201ENST00000604513 294 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 AC004908.3-201ENST00000610248 625 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 TUSC7.1-201ENST00000610969 165 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK1AO00322 AC005858.4-201ENST00000623191 700 ntBASIC1.41□□□□□ -2.18
UPK1AO00322 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
UPK1AO00322 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
UPK1AO00322 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
UPK1AO00322 OR4G2P-201ENST00000328113 903 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 RNU6-942P-201ENST00000363002 107 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 RNU6-1210P-201ENST00000363775 107 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 SNORD14B-201ENST00000364533 90 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 RNU6-1274P-201ENST00000384557 107 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 RNU6-1179P-201ENST00000384667 107 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 MIR513B-201ENST00000385136 84 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 RNA5SP465-201ENST00000391195 109 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.4□□□□□ -2.19
UPK1AO00322 AL591806.2-201ENST00000433122 173 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.4□□□□□ -2.19
UPK1AO00322 MTND2P29-201ENST00000438595 412 ntBASIC1.4□□□□□ -2.19
UPK1AO00322 CALM1P1-201ENST00000442082 433 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms