Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFXAPO00287 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
RFXAPO00287 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.94□□□□□ -1.78
RFXAPO00287 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFXAPO00287 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.94□□□□□ -1.78
RFXAPO00287 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFXAPO00287 RNU4-35P-201ENST00000362588 141 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 RNU6-1020P-201ENST00000363684 107 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 UBA52P6-201ENST00000399822 382 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 MIR190B-201ENST00000401119 79 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 RPL23AP48-201ENST00000406913 488 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.94□□□□□ -1.78
RFXAPO00287 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.94□□□□□ -1.78
RFXAPO00287 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.94□□□□□ -1.78
RFXAPO00287 ELOCP18-201ENST00000434209 337 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.94□□□□□ -1.78
RFXAPO00287 RNU6-1037P-201ENST00000459571 107 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.94□□□□□ -1.78
RFXAPO00287 SNORA31.18-201ENST00000517043 134 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 RNU6-840P-201ENST00000517275 65 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.94□□□□□ -1.78
RFXAPO00287 AC103996.1-201ENST00000555468 102 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 MIR3144-201ENST00000579460 79 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 AL591424.2-201ENST00000617023 128 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 AC074140.1-201ENST00000621617 208 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 MIR4727-201ENST00000622232 55 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFXAPO00287 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.94□□□□□ -1.78
RFXAPO00287 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFXAPO00287 BX322639.1-202ENST00000423987 2213 ntBASIC3.94□□□□□ -1.78
RFXAPO00287 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFXAPO00287 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFXAPO00287 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RFXAPO00287 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.93□□□□□ -1.78
RFXAPO00287 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RFXAPO00287 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFXAPO00287 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFXAPO00287 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFXAPO00287 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFXAPO00287 SNORD74.4-201ENST00000364129 80 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 RNU6-290P-201ENST00000365212 101 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 RNY3P4-201ENST00000384428 101 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RFXAPO00287 SNORA12.2-201ENST00000391040 156 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 U3.39-201ENST00000408569 239 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 SNORD56-201ENST00000413522 71 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 AL592148.1-201ENST00000413568 445 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFXAPO00287 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.93□□□□□ -1.78
RFXAPO00287 SETP5-201ENST00000437270 562 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.93□□□□□ -1.78
RFXAPO00287 NDUFB4P10-201ENST00000452541 359 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFXAPO00287 RNU6-1095P-201ENST00000516148 108 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 MIR892C-201ENST00000516410 77 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 AL590705.4-201ENST00000532209 134 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 TRAV37-201ENST00000553906 342 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 Z83818.1-201ENST00000603584 150 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 MIR8076-201ENST00000611401 83 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
RFXAPO00287 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFXAPO00287 AL353743.1-202ENST00000431724 1695 ntBASIC3.93□□□□□ -1.78
RFXAPO00287 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFXAPO00287 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFXAPO00287 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RFXAPO00287 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFXAPO00287 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.92□□□□□ -1.78
RFXAPO00287 RNU6-222P-201ENST00000362438 107 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 Y_RNA.44-201ENST00000362676 108 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 RNA5SP374-201ENST00000362939 125 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 RNU6-512P-201ENST00000364438 103 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 Y_RNA.292-201ENST00000364904 97 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 RNU2-43P-201ENST00000410306 190 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 RPS20P1-201ENST00000434853 354 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.92□□□□□ -1.78
RFXAPO00287 RBMY2UP-201ENST00000453474 324 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 RN7SL429P-201ENST00000479090 223 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 RN7SL489P-201ENST00000486185 223 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 RN7SL327P-201ENST00000488659 223 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.92□□□□□ -1.78
RFXAPO00287 AC074133.1-201ENST00000515696 183 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 RNA5SP208-201ENST00000516156 78 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 RNY3P16-201ENST00000516338 101 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 RNU6-1012P-201ENST00000516606 109 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.92□□□□□ -1.78
RFXAPO00287 RN7SL853P-201ENST00000617250 223 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 AP001005.3-201ENST00000622049 129 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.92□□□□□ -1.78
RFXAPO00287 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFXAPO00287 AC008725.1-201ENST00000605123 2263 ntBASIC3.92□□□□□ -1.78
RFXAPO00287 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFXAPO00287 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFXAPO00287 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RFXAPO00287 AC007785.2-201ENST00000598627 1916 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 AP001486.2-201ENST00000561652 5113 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.91□□□□□ -1.78
RFXAPO00287 NCAPGP1-201ENST00000505112 1814 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RFXAPO00287 RNU6-923P-201ENST00000364753 107 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 U3.13-201ENST00000364804 214 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 312.7 ms