Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PDLIM1O00151 RNA5SP112-201ENST00000515937 99 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 RNU6-1178P-201ENST00000516674 107 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PDLIM1O00151 AC135279.1-201ENST00000543493 504 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 OR11H5P-201ENST00000554039 926 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 ANP32BP3-201ENST00000559213 706 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 AC027176.1-201ENST00000560204 514 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.19□□□□□ -2.06
PDLIM1O00151 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.19□□□□□ -2.06
PDLIM1O00151 MIR3935-201ENST00000583472 104 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.19□□□□□ -2.06
PDLIM1O00151 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.19□□□□□ -2.06
PDLIM1O00151 AC009509.4-201ENST00000619202 509 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 AC010378.1-201ENST00000619270 362 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.19□□□□□ -2.06
PDLIM1O00151 CTSLP2-204ENST00000629029 392 ntBASIC2.19□□□□□ -2.06
PDLIM1O00151 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.19□□□□□ -2.06
PDLIM1O00151 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PDLIM1O00151 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PDLIM1O00151 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PDLIM1O00151 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.18□□□□□ -2.06
PDLIM1O00151 AL354685.2-201ENST00000448218 1447 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 AC016717.2-201ENST00000609089 5141 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 Z75746.1-201ENST00000440243 2080 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PDLIM1O00151 RNU6-1120P-201ENST00000362988 108 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 RNU6-486P-201ENST00000363116 107 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 RNU5A-6P-201ENST00000384136 116 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 RNU6-72P-201ENST00000384285 79 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PDLIM1O00151 AL359511.1-201ENST00000402970 211 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 CIR1P3-201ENST00000405137 479 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 GSTA9P-201ENST00000406231 611 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 MTATP6P18-201ENST00000417994 673 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 AC097463.2-201ENST00000421074 142 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.18□□□□□ -2.06
PDLIM1O00151 AC073464.1-201ENST00000429823 534 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 MICF-203ENST00000432679 129 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.18□□□□□ -2.06
PDLIM1O00151 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.18□□□□□ -2.06
PDLIM1O00151 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.18□□□□□ -2.06
PDLIM1O00151 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.18□□□□□ -2.06
PDLIM1O00151 AC112771.1-201ENST00000463581 102 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 MTND3P25-201ENST00000509243 135 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.18□□□□□ -2.06
PDLIM1O00151 AC104136.1-201ENST00000512969 394 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 RNU2-44P-201ENST00000516795 194 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.18□□□□□ -2.06
PDLIM1O00151 RPL7P20-201ENST00000520308 745 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 AP005902.1-201ENST00000521358 186 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 MTND1P15-201ENST00000579262 949 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 AC007621.1-201ENST00000604544 437 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 AC069294.1-201ENST00000608397 350 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 AC007684.1-201ENST00000609671 477 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.18□□□□□ -2.06
PDLIM1O00151 AP001486.3-201ENST00000615334 372 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.18□□□□□ -2.06
PDLIM1O00151 uc_338.11-201ENST00000619132 160 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
PDLIM1O00151 AC091932.3-201ENST00000624223 323 ntBASIC2.18□□□□□ -2.06
PDLIM1O00151 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.18□□□□□ -2.06
PDLIM1O00151 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.18□□□□□ -2.06
PDLIM1O00151 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
PDLIM1O00151 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PDLIM1O00151 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.17□□□□□ -2.06
PDLIM1O00151 MIR449A-201ENST00000362113 91 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 RNU6-384P-201ENST00000364900 104 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 RNU6-45P-201ENST00000384471 107 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 RNU6-606P-201ENST00000384721 111 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 CYCSP48-201ENST00000417124 323 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.17□□□□□ -2.06
PDLIM1O00151 RPL30P4-201ENST00000429309 333 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 AC002486.1-201ENST00000435098 391 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.17□□□□□ -2.06
PDLIM1O00151 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.17□□□□□ -2.06
PDLIM1O00151 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.17□□□□□ -2.06
PDLIM1O00151 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
PDLIM1O00151 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.17□□□□□ -2.06
PDLIM1O00151 AC074344.1-201ENST00000512823 224 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 RNU1-86P-201ENST00000516108 154 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 MIR892C-201ENST00000516410 77 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 RNU5B-3P-201ENST00000516601 115 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 RNU1-107P-201ENST00000516617 154 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 RNA5SP364-201ENST00000516938 78 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.17□□□□□ -2.06
PDLIM1O00151 AP004607.1-201ENST00000524456 203 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 AP003392.2-201ENST00000527269 208 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.17□□□□□ -2.06
PDLIM1O00151 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PDLIM1O00151 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.17□□□□□ -2.06
PDLIM1O00151 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.17□□□□□ -2.06
PDLIM1O00151 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 AC026585.1-201ENST00000619582 524 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 AC138627.2-201ENST00000624202 601 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 ZNF680P1-201ENST00000436625 1469 ntBASIC2.17□□□□□ -2.06
PDLIM1O00151 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.17□□□□□ -2.06
PDLIM1O00151 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PDLIM1O00151 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms