Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NPIPA3F8WFD2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 SNORD62.1-201ENST00000362541 86 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-37P-201ENST00000362692 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-11P-201ENST00000364234 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 U3.12-201ENST00000364498 214 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-25P-201ENST00000383873 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 SNORA69-201ENST00000383895 132 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-1-201ENST00000383898 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-48P-201ENST00000384161 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-36P-201ENST00000384172 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-4P-201ENST00000384205 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-5P-201ENST00000384238 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-3P-201ENST00000384314 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 Y_RNA.481-201ENST00000384373 102 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-16P-201ENST00000384385 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-15P-201ENST00000384534 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-2-201ENST00000384627 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-29P-201ENST00000384637 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 SNORD116-4-201ENST00000384733 96 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-9-201ENST00000384776 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-33P-201ENST00000384793 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 MIR181B1-201ENST00000385240 110 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AC138623.1-201ENST00000418060 216 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AC097463.2-201ENST00000421074 142 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU7-180P-201ENST00000459240 63 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 SMURF2P1-201ENST00000514992 481 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-314P-201ENST00000516574 104 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 SNORA31.15-201ENST00000516771 132 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 MTND4P7-201ENST00000523876 130 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 CR383656.8-201ENST00000549046 145 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AL512360.1-201ENST00000555346 234 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AC007621.1-201ENST00000604544 437 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AC012557.2-201ENST00000605919 418 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 RNU6-6P-201ENST00000606623 107 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 uc_338.34-201ENST00000617467 174 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 AP003400.5-201ENST00000624827 617 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 MIR7157-201ENST00000635801 60 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 MIR3529-201ENST00000637713 78 ntBASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NPIPA3F8WFD2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 RNU6-486P-201ENST00000363116 107 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 Y_RNA.372-201ENST00000365599 102 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 RNU6-220P-201ENST00000390919 107 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 RNU6-780P-201ENST00000391030 104 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 RNU6-1140P-201ENST00000410517 106 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AL365400.1-201ENST00000431854 640 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 MICF-203ENST00000432679 129 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AC104389.3-201ENST00000445629 235 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 MRPL50P4-201ENST00000446432 475 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AL513328.1-201ENST00000446460 224 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AC006026.2-201ENST00000457376 180 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AC083798.1-201ENST00000472671 131 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AC090096.1-201ENST00000489168 390 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 RNA5SP401-201ENST00000515920 127 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 RNU6-506P-201ENST00000516553 94 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 RPL7P20-201ENST00000520308 745 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 MIR3616-201ENST00000584070 92 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AC021646.1-201ENST00000605469 484 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AC002044.1-201ENST00000606707 158 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AF250324.2-201ENST00000608299 610 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AC092954.2-201ENST00000609103 430 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AC087241.4-201ENST00000612441 480 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 RMST_7.1-201ENST00000621935 268 ntBASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NPIPA3F8WFD2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 RNU5E-7P-201ENST00000365290 117 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 RNU6-843P-201ENST00000384454 104 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AL590004.2-201ENST00000404787 371 ntBASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.36□□□□□ -2.03
NPIPA3F8WFD2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms