Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.02□□□□□ -1.77
CCDC85CA6NKD9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 LINC02471-203ENST00000641941 4752 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 Y_RNA.2-201ENST00000362330 96 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 Y_RNA.463-201ENST00000384271 102 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 SNORD96B-201ENST00000386148 79 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 RNA5SP252-201ENST00000391131 119 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 FTH1P15-201ENST00000406984 280 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 AP000275.1-201ENST00000411943 390 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 HMGB1P37-201ENST00000439613 609 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 AL118496.2-201ENST00000448300 230 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 MRPL42P6-201ENST00000486397 371 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 AC108022.1-201ENST00000493466 478 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 SNORA31.18-201ENST00000517043 134 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 GTF3AP2-201ENST00000557014 266 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 RMST_9.1-201ENST00000619945 193 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 AC091925.1-201ENST00000623204 462 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 AC090617.7-201ENST00000623952 126 ntBASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC85CA6NKD9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC85CA6NKD9 RNU6-227P-201ENST00000362865 103 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 RNU6-490P-201ENST00000362985 107 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 Y_RNA.132-201ENST00000363421 102 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 Y_RNA.202-201ENST00000364083 110 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 RNU6-1280P-201ENST00000365211 107 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 RNU6-487P-201ENST00000365430 104 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 RNU6-331P-201ENST00000384724 107 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 snosnR66.1-201ENST00000391095 99 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 HNRNPDLP1-201ENST00000412834 550 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 AL365496.1-201ENST00000426885 215 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 RPS15AP5-201ENST00000436276 388 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4□□□□□ -1.77
CCDC85CA6NKD9 AC124916.1-201ENST00000444020 547 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4□□□□□ -1.77
CCDC85CA6NKD9 AL163540.1-201ENST00000485382 386 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 AC110794.1-201ENST00000505816 425 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4□□□□□ -1.77
CCDC85CA6NKD9 SNORA31.21-201ENST00000517180 77 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 IGKV2-26-201ENST00000518305 343 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4□□□□□ -1.77
CCDC85CA6NKD9 SUB1P3-201ENST00000564581 315 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 MTCO3P13-201ENST00000577757 781 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 MIR5696-201ENST00000578474 85 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 MIR3199-2-201ENST00000636243 86 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC85CA6NKD9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CCDC85CA6NKD9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
CCDC85CA6NKD9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC85CA6NKD9 ADAM3A-203ENST00000461344 2157 ntBASIC4□□□□□ -1.77
CCDC85CA6NKD9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4□□□□□ -1.77
CCDC85CA6NKD9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4□□□□□ -1.77
CCDC85CA6NKD9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC85CA6NKD9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4□□□□□ -1.77
CCDC85CA6NKD9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 RNA5SP197-201ENST00000363357 119 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AL357075.1-201ENST00000404107 726 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 BX276092.3-201ENST00000424182 230 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 ATP5HP2-201ENST00000433885 485 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AL035666.1-201ENST00000446195 348 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 MIR2053-201ENST00000459295 91 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 MED28P2-201ENST00000475771 317 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 MTND6P33-201ENST00000571794 183 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AC009163.5-201ENST00000575421 637 ntBASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC85CA6NKD9 AC020895.1-201ENST00000595362 272 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms