Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 RNU6-1085P-201ENST00000363576 107 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 SNORA69-201ENST00000383895 132 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 RNU6-220P-201ENST00000390919 107 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 RNU6-908P-201ENST00000410160 94 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC007064.1-201ENST00000412238 351 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 RPL30P16-201ENST00000419341 429 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 EIF1P1-201ENST00000421436 341 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC137499.1-201ENST00000427602 88 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 MTATP6P13-201ENST00000438531 667 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC073415.1-201ENST00000449240 153 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC139453.3-201ENST00000493276 369 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 CCDC34P1-201ENST00000507441 517 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC107222.1-201ENST00000510899 637 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 SNORA40.12-201ENST00000516329 111 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 SNORA31.11-201ENST00000516528 139 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 RN7SKP219-201ENST00000516825 296 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 RNU6-143P-201ENST00000516942 93 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 SCARNA3-201ENST00000517097 143 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 MTND1P35-201ENST00000526739 508 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC091544.4-201ENST00000555268 342 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AL118558.2-201ENST00000556294 238 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC012507.3-201ENST00000603556 477 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 AC012409.4-201ENST00000612923 249 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 uc_338.14-201ENST00000613162 166 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 FO624990.1-201ENST00000636373 85 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 MTND4P35-201ENST00000604257 1375 ntBASIC2.45□□□□□ -2.02
TRIM49BA6NDI0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 RNU6-451P-201ENST00000362921 107 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 RNU6-960P-201ENST00000364056 120 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 RNU6-534P-201ENST00000364877 106 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 SNORA80E-201ENST00000384744 137 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 MIR181A1-201ENST00000385026 110 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 MIR454-201ENST00000390180 115 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 RN7SKP284-201ENST00000411002 343 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 EEF1A1P40-201ENST00000412883 573 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 OOSP1P1-201ENST00000423265 274 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 USP9YP18-201ENST00000425912 695 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 MRPS10P2-201ENST00000431226 381 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 RNU7-63P-201ENST00000459054 62 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 SNORD97-201ENST00000459187 142 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 MTCO3P38-201ENST00000468910 766 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AC117522.1-201ENST00000509821 380 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AC010493.1-201ENST00000513479 292 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 RNU6-1281P-201ENST00000516223 105 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 RNA5SP24-201ENST00000516478 95 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AL512310.1-201ENST00000548639 172 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AL133241.1-201ENST00000556832 487 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AC025678.1-201ENST00000567861 338 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 MIR4703-201ENST00000577728 79 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 MIR5571-201ENST00000577998 113 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 AC022893.3-201ENST00000607665 437 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 YWHAEP7-203ENST00000622054 312 ntBASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM49BA6NDI0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 RNU6-552P-201ENST00000362869 119 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 SNORD3E-201ENST00000362899 217 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 RNU6-1120P-201ENST00000362988 108 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 Y_RNA.89-201ENST00000363031 102 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 RNU6-179P-201ENST00000363350 107 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 RNU6-1097P-201ENST00000363586 107 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 SNORA67.1-201ENST00000364749 141 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 RNU6-1303P-201ENST00000364841 107 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 RNU4-48P-201ENST00000365559 182 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 SNORA4.3-201ENST00000365564 137 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 RNU6-116P-201ENST00000384042 109 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 RNU6-190P-201ENST00000384154 102 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 MIR218-1-201ENST00000384999 110 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 MIR147B-201ENST00000390185 80 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 RNU6-550P-201ENST00000391057 101 ntBASIC2.43□□□□□ -2.02
TRIM49BA6NDI0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms