Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AL035666.1-201ENST00000446195 348 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 HMGB3P8-201ENST00000449709 577 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 AC115115.1-201ENST00000449927 248 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 PTP4A1P4-201ENST00000512479 322 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 ACA59.1-201ENST00000515966 143 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 Y_RNA.687-201ENST00000516558 91 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 AMZ2P1-203ENST00000565833 850 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 MIR5680-201ENST00000577577 84 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 AC012531.5-201ENST00000611375 151 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 SCARNA4-202ENST00000625402 129 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 SRP72P2-201ENST00000344851 1979 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 RPL9P7-201ENST00000330965 580 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 RNU6-490P-201ENST00000362985 107 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 SNORA63C-201ENST00000364578 129 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 RNU6-72P-201ENST00000384285 79 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 RNU6-658P-201ENST00000384606 106 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 SNORA41-201ENST00000384675 132 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AL513475.1-201ENST00000406602 315 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 RNA5SP229-201ENST00000410809 99 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AL513043.1-201ENST00000439124 535 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 RPL37P4-201ENST00000448908 268 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AC013470.1-201ENST00000453438 462 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 RNU7-170P-201ENST00000459303 61 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 snoU109.2-201ENST00000459316 135 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 RPL9P9-202ENST00000466501 579 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 RN7SL442P-201ENST00000473804 320 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 RN7SKP295-201ENST00000517264 153 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AC104027.1-201ENST00000521887 300 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 SYF2P1-201ENST00000550658 413 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 LINC00933-203ENST00000559812 219 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 MIR5047-201ENST00000579212 100 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AC009314.1-201ENST00000603871 304 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AC018889.1-201ENST00000605372 397 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AC005000.2-201ENST00000605468 310 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 YPEL5P2-201ENST00000605553 359 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AL162730.1-201ENST00000605734 292 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 uc_338.1-201ENST00000612113 180 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 AC138627.2-201ENST00000624202 601 ntBASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPDC1A2A3K4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 AC002546.1-201ENST00000588041 2504 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 RNU6-884P-201ENST00000363889 107 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 Y_RNA.252-201ENST00000364556 101 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 RNU6-1317P-201ENST00000364582 104 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 Z98749.2-208ENST00000381646 500 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 RNU6-639P-201ENST00000384074 107 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 SNORA1.3-201ENST00000384676 136 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 RNU6-174P-201ENST00000410406 106 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 RPL23AP50-201ENST00000434149 455 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 AC006028.1-201ENST00000438379 402 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 U8.21-201ENST00000459536 136 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 RN7SL504P-201ENST00000494496 287 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 AC116312.1-201ENST00000606841 314 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 AC004852.3-201ENST00000614131 326 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 MIR8057-201ENST00000620957 69 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 U6.98-201ENST00000637157 84 ntBASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPDC1A2A3K4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.84□□□□□ -1.8
PTPDC1A2A3K4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PTPDC1A2A3K4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTPDC1A2A3K4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.84□□□□□ -1.8
PTPDC1A2A3K4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
PTPDC1A2A3K4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPDC1A2A3K4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPDC1A2A3K4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PTPDC1A2A3K4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPDC1A2A3K4 AC117470.1-201ENST00000381974 330 ntBASIC3.83□□□□□ -1.8
PTPDC1A2A3K4 SNORA48.2-201ENST00000390926 124 ntBASIC3.83□□□□□ -1.8
PTPDC1A2A3K4 RPS4XP3-201ENST00000398541 413 ntBASIC3.83□□□□□ -1.8
PTPDC1A2A3K4 U3.37-201ENST00000408528 213 ntBASIC3.83□□□□□ -1.8
PTPDC1A2A3K4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms