Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AP000942.3-201ENST00000603702 160 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC025754.2-201ENST00000606491 432 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 RMST_10.1-201ENST00000616309 154 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC009268.2-201ENST00000621925 457 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC018630.2-201ENST00000534866 2403 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-512P-201ENST00000364438 103 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AL356776.1-201ENST00000406574 447 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 HMGN1P14-201ENST00000412459 517 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 EBAG9P1-201ENST00000418955 543 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AC234064.1-201ENST00000436312 247 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 snoU13.8-201ENST00000458890 104 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 RN7SKP265-201ENST00000516448 223 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 RNA5SP168-201ENST00000516642 112 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 RNA5SP437-201ENST00000517249 129 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AP000907.2-201ENST00000530827 353 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AC093012.1-202ENST00000549403 582 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 EIF1AXP2-201ENST00000555940 413 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 HMGB1P33-201ENST00000563485 527 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR4782-201ENST00000577987 79 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR4637-201ENST00000582405 84 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AC104465.1-201ENST00000611365 139 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 AL133216.2-202ENST00000634512 349 ntBASIC0.29□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-359P-201ENST00000365466 108 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-110P-201ENST00000384508 104 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR10B-201ENST00000385011 110 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR764-201ENST00000390811 85 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 SNORD65C-201ENST00000390962 71 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 MTND4P24-201ENST00000424002 397 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 CETN4P-201ENST00000432407 469 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 AC244505.5-201ENST00000443639 207 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 MTCO2P25-201ENST00000447065 681 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 RPS27AP8-201ENST00000452665 445 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 MTND1P9-201ENST00000453775 944 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 MTND2P6-201ENST00000455337 1030 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 TOMM22P6-201ENST00000465035 409 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 RN7SL429P-201ENST00000479090 223 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 RN7SL489P-201ENST00000486185 223 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 RN7SL327P-201ENST00000488659 223 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 AC008837.2-201ENST00000513076 418 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 AC109446.2-201ENST00000567872 497 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 RN7SL853P-201ENST00000617250 223 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 AL589994.2-201ENST00000621124 579 ntBASIC0.28□□□□□ -2.36
TRAV13-2A0A0B4J235 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6-655P-201ENST00000362858 107 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 SNORD114-27-201ENST00000363766 70 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 SNORD56.4-201ENST00000363883 71 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 SUGT1P1-201ENST00000379514 476 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 SNORA50A-201ENST00000384225 134 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 FTH1P15-201ENST00000406984 280 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 AC114737.2-201ENST00000421583 173 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU1-131P-201ENST00000458943 161 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU5A-4P-201ENST00000516588 111 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6-714P-201ENST00000516963 103 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 AC090578.1-201ENST00000604955 591 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 snoU13.31-201ENST00000607291 104 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 AC132825.7-201ENST00000638744 335 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 AC099063.3-201ENST00000642066 185 ntBASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
TRAV13-2A0A0B4J235 AC009541.1-201ENST00000438279 2662 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6-223P-201ENST00000362830 107 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 Y_RNA.124-201ENST00000363339 93 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6-1066P-201ENST00000363573 105 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 CBX3P9-201ENST00000402326 552 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6-575P-201ENST00000411326 105 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 MTND1P21-201ENST00000412991 285 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms