Protein–RNA interactions for Protein: Q9CZG9

Pdzd11, PDZ domain-containing protein 11, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd11Q9CZG9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdzd11Q9CZG9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdzd11Q9CZG9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pdzd11Q9CZG9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Pdzd11Q9CZG9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdzd11Q9CZG9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pdzd11Q9CZG9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Gm8493-201ENSMUST00000196881 489 ntBASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Pdzd11Q9CZG9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdzd11Q9CZG9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdzd11Q9CZG9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pdzd11Q9CZG9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms