Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ECHDC3Q96DC8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19■□□□□ 0.63
ECHDC3Q96DC8 FAM210CP-201ENST00000445714 574 ntBASIC19■□□□□ 0.63
ECHDC3Q96DC8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19■□□□□ 0.63
ECHDC3Q96DC8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ECHDC3Q96DC8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ECHDC3Q96DC8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ECHDC3Q96DC8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC3Q96DC8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 AL137013.1-201ENST00000432946 1228 ntBASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 AL138966.2-201ENST00000621997 464 ntBASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 AC092865.7-201ENST00000641832 219 ntBASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC3Q96DC8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 GPAT2P1-201ENST00000444924 1672 ntBASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 AL512353.2-201ENST00000448759 1962 ntBASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.98■□□□□ 0.63
ECHDC3Q96DC8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 AL023284.2-201ENST00000405850 579 ntBASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 AL512604.3-201ENST00000569583 964 ntBASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 KRT8P32-201ENST00000512863 1461 ntBASIC18.97■□□□□ 0.63
ECHDC3Q96DC8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms