Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.56■□□□□ 0.24
USP9XQ93008 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
USP9XQ93008 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.56■□□□□ 0.24
USP9XQ93008 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.56■□□□□ 0.24
USP9XQ93008 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP9XQ93008 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP9XQ93008 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
USP9XQ93008 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
USP9XQ93008 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
USP9XQ93008 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.56■□□□□ 0.24
USP9XQ93008 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
USP9XQ93008 AC006128.1-201ENST00000624704 1661 ntBASIC16.55■□□□□ 0.24
USP9XQ93008 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.55■□□□□ 0.24
USP9XQ93008 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
USP9XQ93008 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.55■□□□□ 0.24
USP9XQ93008 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
USP9XQ93008 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.55■□□□□ 0.24
USP9XQ93008 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.55■□□□□ 0.24
USP9XQ93008 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.55■□□□□ 0.24
USP9XQ93008 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.55■□□□□ 0.24
USP9XQ93008 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 AC007225.1-201ENST00000566331 1836 ntBASIC16.55■□□□□ 0.24
USP9XQ93008 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.55■□□□□ 0.24
USP9XQ93008 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
USP9XQ93008 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP9XQ93008 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP9XQ93008 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP9XQ93008 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
USP9XQ93008 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.54■□□□□ 0.24
USP9XQ93008 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.54■□□□□ 0.24
USP9XQ93008 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.54■□□□□ 0.24
USP9XQ93008 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.54■□□□□ 0.24
USP9XQ93008 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
USP9XQ93008 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
USP9XQ93008 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
USP9XQ93008 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.54■□□□□ 0.24
USP9XQ93008 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP9XQ93008 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP9XQ93008 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP9XQ93008 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.54■□□□□ 0.24
USP9XQ93008 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
USP9XQ93008 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.54■□□□□ 0.24
USP9XQ93008 GPX1P2-201ENST00000429271 606 ntBASIC16.54■□□□□ 0.24
USP9XQ93008 HNRNPDP1-201ENST00000439535 754 ntBASIC16.54■□□□□ 0.24
USP9XQ93008 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
USP9XQ93008 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.54■□□□□ 0.24
USP9XQ93008 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.54■□□□□ 0.24
USP9XQ93008 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP9XQ93008 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
USP9XQ93008 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.53■□□□□ 0.24
USP9XQ93008 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
USP9XQ93008 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
USP9XQ93008 KRT18P23-201ENST00000435622 1283 ntBASIC16.53■□□□□ 0.24
USP9XQ93008 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.53■□□□□ 0.24
USP9XQ93008 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
USP9XQ93008 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.53■□□□□ 0.24
USP9XQ93008 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
USP9XQ93008 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.53■□□□□ 0.24
USP9XQ93008 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
USP9XQ93008 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
USP9XQ93008 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.53■□□□□ 0.24
USP9XQ93008 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.53■□□□□ 0.24
USP9XQ93008 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
USP9XQ93008 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP9XQ93008 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP9XQ93008 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP9XQ93008 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.52■□□□□ 0.24
USP9XQ93008 CYMP-203ENST00000474680 1263 ntBASIC16.52■□□□□ 0.24
USP9XQ93008 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.52■□□□□ 0.24
USP9XQ93008 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.52■□□□□ 0.24
USP9XQ93008 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.52■□□□□ 0.24
USP9XQ93008 AL592071.1-201ENST00000611956 408 ntBASIC16.52■□□□□ 0.24
USP9XQ93008 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms