Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 AC005332.3-201ENST00000589904 676 ntBASIC16.49■□□□□ 0.23
LRRK2Q5S007 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 RPS8P6-201ENST00000426177 609 ntBASIC16.49■□□□□ 0.23
LRRK2Q5S007 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 AL355877.3-201ENST00000622820 899 ntBASIC16.49■□□□□ 0.23
LRRK2Q5S007 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRK2Q5S007 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LRRK2Q5S007 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LRRK2Q5S007 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LRRK2Q5S007 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRRK2Q5S007 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRK2Q5S007 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRK2Q5S007 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRK2Q5S007 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.48■□□□□ 0.23
LRRK2Q5S007 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRK2Q5S007 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRK2Q5S007 AL049840.3-201ENST00000602669 611 ntBASIC16.48■□□□□ 0.23
LRRK2Q5S007 FAM215A-202ENST00000632077 792 ntBASIC16.48■□□□□ 0.23
LRRK2Q5S007 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRK2Q5S007 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRK2Q5S007 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRK2Q5S007 FAM197Y3-203ENST00000618346 717 ntBASIC16.47■□□□□ 0.23
LRRK2Q5S007 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRK2Q5S007 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LRRK2Q5S007 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRK2Q5S007 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRK2Q5S007 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRK2Q5S007 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRK2Q5S007 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRK2Q5S007 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRK2Q5S007 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRK2Q5S007 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRK2Q5S007 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRRK2Q5S007 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRK2Q5S007 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms