Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUBP1P53384 HTR5BP-201ENST00000430851 1154 ntBASIC18.92■□□□□ 0.62
NUBP1P53384 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC18.92■□□□□ 0.62
NUBP1P53384 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.92■□□□□ 0.62
NUBP1P53384 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.92■□□□□ 0.62
NUBP1P53384 MIR3687-2-201ENST00000577708 61 ntBASIC18.92■□□□□ 0.62
NUBP1P53384 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.92■□□□□ 0.62
NUBP1P53384 MIR3687-1-201ENST00000614492 61 ntBASIC18.92■□□□□ 0.62
NUBP1P53384 FAM197Y3-203ENST00000618346 717 ntBASIC18.92■□□□□ 0.62
NUBP1P53384 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUBP1P53384 KRT8P7-201ENST00000533003 1432 ntBASIC18.91■□□□□ 0.62
NUBP1P53384 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
NUBP1P53384 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.91■□□□□ 0.62
NUBP1P53384 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NUBP1P53384 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NUBP1P53384 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 AL591424.1-201ENST00000442569 1213 ntBASIC18.91■□□□□ 0.62
NUBP1P53384 AC007919.2-201ENST00000444110 511 ntBASIC18.91■□□□□ 0.62
NUBP1P53384 DNAJB3-201ENST00000446806 729 ntBASIC18.91■□□□□ 0.62
NUBP1P53384 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.91■□□□□ 0.62
NUBP1P53384 AC018712.1-201ENST00000455767 687 ntBASIC18.91■□□□□ 0.62
NUBP1P53384 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.91■□□□□ 0.62
NUBP1P53384 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.91■□□□□ 0.62
NUBP1P53384 AC027601.4-201ENST00000611259 610 ntBASIC18.91■□□□□ 0.62
NUBP1P53384 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
NUBP1P53384 AC027348.2-201ENST00000624375 642 ntBASIC18.91■□□□□ 0.62
NUBP1P53384 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.91■□□□□ 0.62
NUBP1P53384 GPAT2P1-201ENST00000444924 1672 ntBASIC18.91■□□□□ 0.62
NUBP1P53384 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUBP1P53384 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NUBP1P53384 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NUBP1P53384 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 AC079834.2-201ENST00000609776 1949 ntBASIC18.9■□□□□ 0.62
NUBP1P53384 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.9■□□□□ 0.62
NUBP1P53384 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
NUBP1P53384 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
NUBP1P53384 RPSAP43-201ENST00000402237 625 ntBASIC18.9■□□□□ 0.62
NUBP1P53384 NUS1P2-201ENST00000417358 873 ntBASIC18.9■□□□□ 0.62
NUBP1P53384 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.9■□□□□ 0.62
NUBP1P53384 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.9■□□□□ 0.62
NUBP1P53384 AC073648.2-201ENST00000510116 352 ntBASIC18.9■□□□□ 0.62
NUBP1P53384 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.9■□□□□ 0.62
NUBP1P53384 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.9■□□□□ 0.62
NUBP1P53384 AC145285.3-201ENST00000564603 959 ntBASIC18.9■□□□□ 0.62
NUBP1P53384 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.9■□□□□ 0.62
NUBP1P53384 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.9■□□□□ 0.62
NUBP1P53384 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC18.9■□□□□ 0.62
NUBP1P53384 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.9■□□□□ 0.62
NUBP1P53384 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.9■□□□□ 0.62
NUBP1P53384 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NUBP1P53384 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.9■□□□□ 0.62
NUBP1P53384 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
NUBP1P53384 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.9■□□□□ 0.62
NUBP1P53384 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUBP1P53384 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.9■□□□□ 0.62
NUBP1P53384 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NUBP1P53384 AC036111.1-201ENST00000533973 1582 ntBASIC18.89■□□□□ 0.62
NUBP1P53384 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
NUBP1P53384 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUBP1P53384 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUBP1P53384 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NUBP1P53384 AL023284.2-201ENST00000405850 579 ntBASIC18.89■□□□□ 0.61
NUBP1P53384 MCCD1P1-208ENST00000445732 328 ntBASIC18.89■□□□□ 0.61
NUBP1P53384 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
NUBP1P53384 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.89■□□□□ 0.61
NUBP1P53384 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.89■□□□□ 0.61
NUBP1P53384 TMF1P1-201ENST00000576058 373 ntBASIC18.89■□□□□ 0.61
NUBP1P53384 GPR32P1-201ENST00000601788 811 ntBASIC18.89■□□□□ 0.61
NUBP1P53384 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUBP1P53384 AC006213.5-201ENST00000619673 288 ntBASIC18.89■□□□□ 0.61
NUBP1P53384 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.89■□□□□ 0.61
NUBP1P53384 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUBP1P53384 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NUBP1P53384 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms