Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HTTP42858 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HTTP42858 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HTTP42858 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HTTP42858 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HTTP42858 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HTTP42858 AC104417.2-201ENST00000562989 1793 ntBASIC21.39■■□□□ 1.01
HTTP42858 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.39■■□□□ 1.01
HTTP42858 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HTTP42858 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.39■■□□□ 1.01
HTTP42858 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.39■■□□□ 1.01
HTTP42858 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.39■■□□□ 1.01
HTTP42858 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
HTTP42858 RPL13AP23-201ENST00000480739 586 ntBASIC21.38■■□□□ 1.01
HTTP42858 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HTTP42858 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.38■■□□□ 1.01
HTTP42858 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.38■■□□□ 1.01
HTTP42858 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.38■■□□□ 1.01
HTTP42858 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.38■■□□□ 1.01
HTTP42858 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.38■■□□□ 1.01
HTTP42858 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.38■■□□□ 1.01
HTTP42858 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.38■■□□□ 1.01
HTTP42858 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
HTTP42858 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.38■■□□□ 1.01
HTTP42858 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.38■■□□□ 1.01
HTTP42858 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.38■■□□□ 1.01
HTTP42858 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.38■■□□□ 1.01
HTTP42858 AC073648.2-201ENST00000510116 352 ntBASIC21.38■■□□□ 1.01
HTTP42858 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
HTTP42858 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.38■■□□□ 1.01
HTTP42858 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HTTP42858 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTTP42858 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTTP42858 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.37■■□□□ 1.01
HTTP42858 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTTP42858 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTTP42858 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTTP42858 IGHV3-22-201ENST00000520721 359 ntBASIC21.37■■□□□ 1.01
HTTP42858 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.37■■□□□ 1.01
HTTP42858 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
HTTP42858 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.37■■□□□ 1.01
HTTP42858 NSUN5P1-202ENST00000421140 1535 ntBASIC21.37■■□□□ 1.01
HTTP42858 NSUN5P2-203ENST00000457352 1529 ntBASIC21.37■■□□□ 1.01
HTTP42858 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HTTP42858 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTTP42858 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.37■■□□□ 1.01
HTTP42858 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HTTP42858 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTTP42858 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.37■■□□□ 1.01
HTTP42858 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.37■■□□□ 1.01
HTTP42858 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.37■■□□□ 1.01
HTTP42858 AL390719.2-201ENST00000606993 987 ntBASIC21.37■■□□□ 1.01
HTTP42858 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.37■■□□□ 1.01
HTTP42858 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTTP42858 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HTTP42858 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTTP42858 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HTTP42858 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTTP42858 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.36■■□□□ 1.01
HTTP42858 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTTP42858 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HTTP42858 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HTTP42858 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTTP42858 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HTTP42858 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HTTP42858 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
HTTP42858 AP005212.1-201ENST00000581547 1997 ntBASIC21.36■■□□□ 1.01
HTTP42858 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTTP42858 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTTP42858 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.36■■□□□ 1.01
HTTP42858 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.36■■□□□ 1.01
HTTP42858 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.36■■□□□ 1.01
HTTP42858 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.36■■□□□ 1.01
HTTP42858 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.36■■□□□ 1.01
HTTP42858 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 TERC-201ENST00000602385 541 ntBASIC21.35■■□□□ 1.01
HTTP42858 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.35■■□□□ 1.01
HTTP42858 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.35■■□□□ 1.01
HTTP42858 FAM197Y8-203ENST00000450145 560 ntBASIC21.35■■□□□ 1.01
HTTP42858 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.35■■□□□ 1.01
HTTP42858 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms