Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
ERCC3P19447 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ERCC3P19447 AC005332.1-201ENST00000577698 1310 ntBASIC21.98■■□□□ 1.11
ERCC3P19447 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ERCC3P19447 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ERCC3P19447 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
ERCC3P19447 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ERCC3P19447 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ERCC3P19447 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.98■■□□□ 1.11
ERCC3P19447 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ERCC3P19447 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.97■■□□□ 1.11
ERCC3P19447 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.97■■□□□ 1.11
ERCC3P19447 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.97■■□□□ 1.11
ERCC3P19447 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ERCC3P19447 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ERCC3P19447 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
ERCC3P19447 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ERCC3P19447 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ERCC3P19447 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ERCC3P19447 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.97■■□□□ 1.11
ERCC3P19447 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
ERCC3P19447 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ERCC3P19447 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ERCC3P19447 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.97■■□□□ 1.11
ERCC3P19447 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.97■■□□□ 1.11
ERCC3P19447 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.97■■□□□ 1.11
ERCC3P19447 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.97■■□□□ 1.11
ERCC3P19447 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ERCC3P19447 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.97■■□□□ 1.11
ERCC3P19447 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ERCC3P19447 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ERCC3P19447 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ERCC3P19447 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.96■■□□□ 1.11
ERCC3P19447 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
ERCC3P19447 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ERCC3P19447 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ERCC3P19447 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
ERCC3P19447 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
ERCC3P19447 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.96■■□□□ 1.11
ERCC3P19447 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.96■■□□□ 1.11
ERCC3P19447 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.96■■□□□ 1.11
ERCC3P19447 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
ERCC3P19447 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
ERCC3P19447 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.96■■□□□ 1.11
ERCC3P19447 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ERCC3P19447 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ERCC3P19447 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
ERCC3P19447 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ERCC3P19447 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.96■■□□□ 1.11
ERCC3P19447 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.96■■□□□ 1.11
ERCC3P19447 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.95■■□□□ 1.11
ERCC3P19447 AC125437.2-201ENST00000625180 2167 ntBASIC21.95■■□□□ 1.1
ERCC3P19447 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ERCC3P19447 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ERCC3P19447 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
ERCC3P19447 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ERCC3P19447 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.95■■□□□ 1.1
ERCC3P19447 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ERCC3P19447 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
ERCC3P19447 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.95■■□□□ 1.1
ERCC3P19447 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.95■■□□□ 1.1
ERCC3P19447 AC093458.2-201ENST00000623150 629 ntBASIC21.95■■□□□ 1.1
ERCC3P19447 AC116407.4-201ENST00000623319 1061 ntBASIC21.95■■□□□ 1.1
ERCC3P19447 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ERCC3P19447 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.95■■□□□ 1.1
ERCC3P19447 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
ERCC3P19447 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ERCC3P19447 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ERCC3P19447 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
ERCC3P19447 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ERCC3P19447 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ERCC3P19447 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ERCC3P19447 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
ERCC3P19447 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ERCC3P19447 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ERCC3P19447 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.94■■□□□ 1.1
ERCC3P19447 AP000523.1-201ENST00000398242 1049 ntBASIC21.94■■□□□ 1.1
ERCC3P19447 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.94■■□□□ 1.1
ERCC3P19447 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.94■■□□□ 1.1
ERCC3P19447 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.94■■□□□ 1.1
ERCC3P19447 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.94■■□□□ 1.1
ERCC3P19447 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ERCC3P19447 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.94■■□□□ 1.1
ERCC3P19447 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.94■■□□□ 1.1
ERCC3P19447 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.94■■□□□ 1.1
ERCC3P19447 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
ERCC3P19447 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ERCC3P19447 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
ERCC3P19447 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.94■■□□□ 1.1
ERCC3P19447 AL158211.5-201ENST00000623583 2518 ntBASIC21.94■■□□□ 1.1
ERCC3P19447 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ERCC3P19447 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
ERCC3P19447 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.93■■□□□ 1.1
ERCC3P19447 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
ERCC3P19447 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ERCC3P19447 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ERCC3P19447 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ERCC3P19447 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.93■■□□□ 1.1
ERCC3P19447 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ERCC3P19447 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms