Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 TERF1P1-201ENST00000311003 1181 ntBASIC17.11■□□□□ 0.33
ZIC3O60481 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.11■□□□□ 0.33
ZIC3O60481 AL137013.1-201ENST00000432946 1228 ntBASIC17.11■□□□□ 0.33
ZIC3O60481 FAM210CP-201ENST00000445714 574 ntBASIC17.11■□□□□ 0.33
ZIC3O60481 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.11■□□□□ 0.33
ZIC3O60481 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZIC3O60481 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.11■□□□□ 0.33
ZIC3O60481 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZIC3O60481 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.11■□□□□ 0.33
ZIC3O60481 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.11■□□□□ 0.33
ZIC3O60481 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZIC3O60481 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.1■□□□□ 0.33
ZIC3O60481 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.1■□□□□ 0.33
ZIC3O60481 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.1■□□□□ 0.33
ZIC3O60481 KRT18P21-201ENST00000515767 1272 ntBASIC17.1■□□□□ 0.33
ZIC3O60481 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.1■□□□□ 0.33
ZIC3O60481 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
ZIC3O60481 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZIC3O60481 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
ZIC3O60481 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.1■□□□□ 0.33
ZIC3O60481 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZIC3O60481 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.1■□□□□ 0.33
ZIC3O60481 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZIC3O60481 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
ZIC3O60481 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ZIC3O60481 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 AL161938.1-201ENST00000569833 2180 ntBASIC17.09■□□□□ 0.33
ZIC3O60481 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.09■□□□□ 0.33
ZIC3O60481 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ZIC3O60481 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.09■□□□□ 0.33
ZIC3O60481 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.09■□□□□ 0.33
ZIC3O60481 MIR4674-201ENST00000582457 87 ntBASIC17.09■□□□□ 0.33
ZIC3O60481 AL138966.2-201ENST00000621997 464 ntBASIC17.09■□□□□ 0.33
ZIC3O60481 AC092865.7-201ENST00000641832 219 ntBASIC17.09■□□□□ 0.33
ZIC3O60481 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.09■□□□□ 0.33
ZIC3O60481 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ZIC3O60481 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.09■□□□□ 0.33
ZIC3O60481 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.09■□□□□ 0.33
ZIC3O60481 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.09■□□□□ 0.33
ZIC3O60481 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.09■□□□□ 0.33
ZIC3O60481 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
ZIC3O60481 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZIC3O60481 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ZIC3O60481 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ZIC3O60481 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ZIC3O60481 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZIC3O60481 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.08■□□□□ 0.33
ZIC3O60481 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZIC3O60481 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ZIC3O60481 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ZIC3O60481 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ZIC3O60481 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZIC3O60481 LIN28AP1-201ENST00000429574 405 ntBASIC17.08■□□□□ 0.32
ZIC3O60481 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.08■□□□□ 0.32
ZIC3O60481 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.08■□□□□ 0.32
ZIC3O60481 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.08■□□□□ 0.32
ZIC3O60481 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.08■□□□□ 0.32
ZIC3O60481 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.08■□□□□ 0.32
ZIC3O60481 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ZIC3O60481 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZIC3O60481 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.08■□□□□ 0.32
ZIC3O60481 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZIC3O60481 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZIC3O60481 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZIC3O60481 GPAT2P1-201ENST00000444924 1672 ntBASIC17.07■□□□□ 0.32
ZIC3O60481 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.07■□□□□ 0.32
ZIC3O60481 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.07■□□□□ 0.32
ZIC3O60481 KRT8P45-201ENST00000414328 1447 ntBASIC17.07■□□□□ 0.32
ZIC3O60481 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms