Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GDF9O60383 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF9O60383 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.49■□□□□ 0.55
GDF9O60383 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
GDF9O60383 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF9O60383 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDF9O60383 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GDF9O60383 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.49■□□□□ 0.55
GDF9O60383 Z83836.1-201ENST00000624605 1642 ntBASIC18.49■□□□□ 0.55
GDF9O60383 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.49■□□□□ 0.55
GDF9O60383 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.48■□□□□ 0.55
GDF9O60383 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDF9O60383 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDF9O60383 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDF9O60383 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GDF9O60383 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDF9O60383 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDF9O60383 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.48■□□□□ 0.55
GDF9O60383 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.48■□□□□ 0.55
GDF9O60383 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
GDF9O60383 AF238378.1-201ENST00000526806 358 ntBASIC18.48■□□□□ 0.55
GDF9O60383 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.48■□□□□ 0.55
GDF9O60383 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
GDF9O60383 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDF9O60383 AL512408.1-201ENST00000569378 2000 ntBASIC18.48■□□□□ 0.55
GDF9O60383 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.48■□□□□ 0.55
GDF9O60383 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GDF9O60383 AC020907.5-201ENST00000624372 1936 ntBASIC18.48■□□□□ 0.55
GDF9O60383 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDF9O60383 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDF9O60383 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
GDF9O60383 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDF9O60383 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 AL691432.2-201ENST00000607222 2038 ntBASIC18.47■□□□□ 0.55
GDF9O60383 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GDF9O60383 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
GDF9O60383 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
GDF9O60383 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.47■□□□□ 0.55
GDF9O60383 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.47■□□□□ 0.55
GDF9O60383 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.47■□□□□ 0.55
GDF9O60383 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.47■□□□□ 0.55
GDF9O60383 SAPCD2P3-201ENST00000455031 850 ntBASIC18.47■□□□□ 0.55
GDF9O60383 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.47■□□□□ 0.55
GDF9O60383 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.47■□□□□ 0.55
GDF9O60383 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
GDF9O60383 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.47■□□□□ 0.55
GDF9O60383 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.47■□□□□ 0.55
GDF9O60383 AP001271.2-201ENST00000624018 1556 ntBASIC18.47■□□□□ 0.55
GDF9O60383 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GDF9O60383 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF9O60383 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GDF9O60383 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.46■□□□□ 0.55
GDF9O60383 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GDF9O60383 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GDF9O60383 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF9O60383 AC233702.3-201ENST00000578656 1387 ntBASIC18.46■□□□□ 0.55
GDF9O60383 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GDF9O60383 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF9O60383 MIR940-201ENST00000401276 94 ntBASIC18.46■□□□□ 0.55
GDF9O60383 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.46■□□□□ 0.55
GDF9O60383 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.46■□□□□ 0.55
GDF9O60383 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
GDF9O60383 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.46■□□□□ 0.55
GDF9O60383 AC064862.7-201ENST00000604520 867 ntBASIC18.46■□□□□ 0.55
GDF9O60383 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF9O60383 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF9O60383 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
GDF9O60383 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDF9O60383 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.46■□□□□ 0.55
GDF9O60383 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GDF9O60383 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.46■□□□□ 0.55
GDF9O60383 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GDF9O60383 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
GDF9O60383 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
GDF9O60383 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDF9O60383 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
GDF9O60383 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF9O60383 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
GDF9O60383 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDF9O60383 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF9O60383 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDF9O60383 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF9O60383 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF9O60383 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF9O60383 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDF9O60383 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
GDF9O60383 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
GDF9O60383 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.45■□□□□ 0.54
GDF9O60383 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.45■□□□□ 0.54
GDF9O60383 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms