Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDX4O14627 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDX4O14627 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDX4O14627 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.33■□□□□ 0.52
CDX4O14627 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.33■□□□□ 0.52
CDX4O14627 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDX4O14627 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDX4O14627 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CDX4O14627 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDX4O14627 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.33■□□□□ 0.52
CDX4O14627 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.32■□□□□ 0.52
CDX4O14627 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
CDX4O14627 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.32■□□□□ 0.52
CDX4O14627 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.32■□□□□ 0.52
CDX4O14627 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CDX4O14627 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.32■□□□□ 0.52
CDX4O14627 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.32■□□□□ 0.52
CDX4O14627 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.32■□□□□ 0.52
CDX4O14627 SAPCD2P3-201ENST00000455031 850 ntBASIC18.32■□□□□ 0.52
CDX4O14627 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 AF238378.1-201ENST00000526806 358 ntBASIC18.32■□□□□ 0.52
CDX4O14627 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDX4O14627 Z69720.1-201ENST00000601483 472 ntBASIC18.32■□□□□ 0.52
CDX4O14627 AL390719.2-201ENST00000606993 987 ntBASIC18.32■□□□□ 0.52
CDX4O14627 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CDX4O14627 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDX4O14627 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.32■□□□□ 0.52
CDX4O14627 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.32■□□□□ 0.52
CDX4O14627 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDX4O14627 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.32■□□□□ 0.52
CDX4O14627 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CDX4O14627 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.31■□□□□ 0.52
CDX4O14627 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDX4O14627 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDX4O14627 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDX4O14627 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDX4O14627 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDX4O14627 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDX4O14627 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDX4O14627 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.31■□□□□ 0.52
CDX4O14627 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.31■□□□□ 0.52
CDX4O14627 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.31■□□□□ 0.52
CDX4O14627 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.31■□□□□ 0.52
CDX4O14627 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.31■□□□□ 0.52
CDX4O14627 AP001005.1-201ENST00000571755 1248 ntBASIC18.31■□□□□ 0.52
CDX4O14627 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.31■□□□□ 0.52
CDX4O14627 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.31■□□□□ 0.52
CDX4O14627 AC064862.7-201ENST00000604520 867 ntBASIC18.31■□□□□ 0.52
CDX4O14627 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDX4O14627 REXO1L6P-202ENST00000619970 1078 ntBASIC18.31■□□□□ 0.52
CDX4O14627 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.31■□□□□ 0.52
CDX4O14627 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDX4O14627 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDX4O14627 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDX4O14627 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDX4O14627 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CDX4O14627 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CDX4O14627 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDX4O14627 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.3■□□□□ 0.52
CDX4O14627 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDX4O14627 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDX4O14627 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDX4O14627 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDX4O14627 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.3■□□□□ 0.52
CDX4O14627 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDX4O14627 AC020907.5-201ENST00000624372 1936 ntBASIC18.3■□□□□ 0.52
CDX4O14627 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDX4O14627 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
CDX4O14627 AP003733.1-201ENST00000491725 852 ntBASIC18.3■□□□□ 0.52
CDX4O14627 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDX4O14627 SLC25A1P1-201ENST00000528351 927 ntBASIC18.3■□□□□ 0.52
CDX4O14627 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.3■□□□□ 0.52
CDX4O14627 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.3■□□□□ 0.52
CDX4O14627 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDX4O14627 TP73-AS1-207ENST00000624167 988 ntBASIC18.3■□□□□ 0.52
CDX4O14627 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.3■□□□□ 0.52
CDX4O14627 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDX4O14627 AC133561.1-201ENST00000568600 2415 ntBASIC18.3■□□□□ 0.52
CDX4O14627 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDX4O14627 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.29■□□□□ 0.52
CDX4O14627 ZNF815P-204ENST00000434898 1737 ntBASIC18.29■□□□□ 0.52
CDX4O14627 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.29■□□□□ 0.52
CDX4O14627 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDX4O14627 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms