Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.23■□□□□ 0.83
SOX1O00570 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SOX1O00570 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX1O00570 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.23■□□□□ 0.83
SOX1O00570 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
SOX1O00570 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SOX1O00570 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SOX1O00570 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
SOX1O00570 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOX1O00570 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SOX1O00570 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.22■□□□□ 0.83
SOX1O00570 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SOX1O00570 AP006288.1-201ENST00000446065 395 ntBASIC20.22■□□□□ 0.83
SOX1O00570 AC132008.2-207ENST00000454517 770 ntBASIC20.22■□□□□ 0.83
SOX1O00570 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
SOX1O00570 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.22■□□□□ 0.83
SOX1O00570 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.22■□□□□ 0.83
SOX1O00570 BNIP3P18-201ENST00000593976 575 ntBASIC20.22■□□□□ 0.83
SOX1O00570 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.22■□□□□ 0.83
SOX1O00570 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOX1O00570 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.22■□□□□ 0.83
SOX1O00570 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.21■□□□□ 0.83
SOX1O00570 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX1O00570 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SOX1O00570 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.21■□□□□ 0.83
SOX1O00570 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX1O00570 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SOX1O00570 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SOX1O00570 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SOX1O00570 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX1O00570 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.21■□□□□ 0.83
SOX1O00570 AC211486.1-202ENST00000416371 468 ntBASIC20.21■□□□□ 0.83
SOX1O00570 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
SOX1O00570 VENTXP7-201ENST00000475503 772 ntBASIC20.21■□□□□ 0.83
SOX1O00570 AC211476.1-201ENST00000503899 468 ntBASIC20.21■□□□□ 0.83
SOX1O00570 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SOX1O00570 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.21■□□□□ 0.83
SOX1O00570 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.21■□□□□ 0.83
SOX1O00570 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.21■□□□□ 0.83
SOX1O00570 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SOX1O00570 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX1O00570 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX1O00570 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.21■□□□□ 0.83
SOX1O00570 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX1O00570 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.21■□□□□ 0.83
SOX1O00570 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX1O00570 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
SOX1O00570 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SOX1O00570 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SOX1O00570 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 AL023284.2-201ENST00000405850 579 ntBASIC20.2■□□□□ 0.82
SOX1O00570 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.2■□□□□ 0.82
SOX1O00570 POM121L3P-201ENST00000419331 1163 ntBASIC20.2■□□□□ 0.82
SOX1O00570 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.2■□□□□ 0.82
SOX1O00570 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.2■□□□□ 0.82
SOX1O00570 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.2■□□□□ 0.82
SOX1O00570 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.2■□□□□ 0.82
SOX1O00570 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.2■□□□□ 0.82
SOX1O00570 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.2■□□□□ 0.82
SOX1O00570 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SOX1O00570 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX1O00570 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX1O00570 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX1O00570 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOX1O00570 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX1O00570 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.19■□□□□ 0.82
SOX1O00570 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOX1O00570 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX1O00570 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX1O00570 AC004832.2-201ENST00000426397 482 ntBASIC20.19■□□□□ 0.82
SOX1O00570 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.19■□□□□ 0.82
SOX1O00570 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.19■□□□□ 0.82
SOX1O00570 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.19■□□□□ 0.82
SOX1O00570 FGFR3P6-201ENST00000457012 610 ntBASIC20.19■□□□□ 0.82
SOX1O00570 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.19■□□□□ 0.82
SOX1O00570 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms