Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RBFOX3A6NFN3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
RBFOX3A6NFN3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RBFOX3A6NFN3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
RBFOX3A6NFN3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RBFOX3A6NFN3 AC080080.1-201ENST00000625121 2420 ntBASIC15.02□□□□□ -0.01
RBFOX3A6NFN3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RBFOX3A6NFN3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RBFOX3A6NFN3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 ZNF815P-204ENST00000434898 1737 ntBASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RBFOX3A6NFN3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 AC087633.2-202ENST00000565166 1439 ntBASIC15□□□□□ -0.01
RBFOX3A6NFN3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 AC105265.2-201ENST00000467189 838 ntBASIC15□□□□□ -0.01
RBFOX3A6NFN3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15□□□□□ -0.01
RBFOX3A6NFN3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RBFOX3A6NFN3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 AL645608.8-201ENST00000606034 2086 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms