Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RNU6-45P-201ENST00000384471 107 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AL138827.1-201ENST00000402666 306 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AL356432.1-201ENST00000405809 419 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 RN7SKP32-201ENST00000410167 303 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 MTND3P8-201ENST00000412909 339 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 RPL21P90-201ENST00000415692 466 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 USP9YP20-201ENST00000419224 558 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AL513043.1-201ENST00000439124 535 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 Z82210.1-201ENST00000440037 231 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 MTND4LP16-201ENST00000440828 295 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 RPL7P12-201ENST00000446719 750 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 RNU7-167P-201ENST00000459160 62 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 RNU7-30P-201ENST00000516835 62 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 RNU6-1315P-201ENST00000517187 99 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 RN7SKP256-201ENST00000517201 314 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AC009902.1-201ENST00000519351 183 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AC087241.2-201ENST00000535801 324 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 MIR4742-201ENST00000581069 85 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 VN1R80P-201ENST00000597126 338 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AC092747.3-201ENST00000603769 301 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AC019159.1-201ENST00000605094 187 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 ATP1B3P1-201ENST00000605365 821 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AC004852.3-201ENST00000614131 326 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AC063943.3-201ENST00000615562 356 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AC009233.1-201ENST00000616477 371 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AC022418.1-201ENST00000624118 445 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AL133216.2-202ENST00000634512 349 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AL512643.1-201ENST00000635735 524 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 AL049641.1-201ENST00000441055 1948 ntBASIC2.97□□□□□ -1.93
SNX9Q9Y5X1 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 RNU6-797P-201ENST00000363101 109 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 Y_RNA.530-201ENST00000384587 101 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 RAP1BP3-201ENST00000407180 549 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 RNU2-3P-201ENST00000410144 191 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AC009161.1-201ENST00000417306 376 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 GPM6BP2-201ENST00000432046 144 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 GPM6BP1-201ENST00000446387 144 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AMD1P1-201ENST00000457220 922 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AC087884.1-201ENST00000469738 328 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AC003982.1-202ENST00000469928 248 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 RPL7P43-201ENST00000478876 753 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AC139453.3-201ENST00000493276 369 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 MTND3P25-201ENST00000509243 135 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 FGF7P4-201ENST00000509595 295 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 RNA5SP356-201ENST00000515972 94 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 RNU6-189P-201ENST00000516120 101 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 RNU6-1282P-201ENST00000516735 96 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 RNA5SP290-201ENST00000517133 127 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AC243972.3-201ENST00000539655 198 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 RPS3AP23-202ENST00000574601 686 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AC099654.5-201ENST00000636479 350 ntBASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
SNX9Q9Y5X1 AL359693.1-201ENST00000614959 2407 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 AC108206.1-201ENST00000570186 4159 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 RNU6-254P-201ENST00000363377 107 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 SNORD21-201ENST00000383953 95 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 Y_RNA.414-201ENST00000384011 101 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 RNU6-1035P-201ENST00000384477 107 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 MIR301A-201ENST00000385261 86 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 RNA5SP219-201ENST00000390940 113 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 RNU6-607P-201ENST00000411283 108 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 RPL19P1-201ENST00000411635 428 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 CYCSP33-201ENST00000414485 327 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 AL353621.1-201ENST00000418219 243 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 RPS29P6-201ENST00000438196 145 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 RPL37P6-201ENST00000460682 294 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 TRBV1-201ENST00000476502 284 ntBASIC2.95□□□□□ -1.94
SNX9Q9Y5X1 RPS15AP34-201ENST00000487776 387 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms