Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 SALL4P2-201ENST00000423288 2910 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 Y_RNA.218-201ENST00000364218 104 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 Y_RNA.293-201ENST00000364908 93 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 EI24P2-201ENST00000397776 1076 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 RNA5SP113-201ENST00000410486 84 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 AC099548.1-201ENST00000421443 426 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 BPY2DP-201ENST00000422208 265 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 AL645608.4-201ENST00000423619 154 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 NDUFB4P6-201ENST00000436819 366 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 U8.19-201ENST00000459095 133 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 AC091179.1-201ENST00000461606 579 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 AC011276.1-201ENST00000469688 323 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 AC005868.1-201ENST00000536421 331 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 CR381572.2-201ENST00000624852 397 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 MIR7641-1-201ENST00000627518 61 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 ADAM3A-203ENST00000461344 2157 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.48□□□□□ -1.69
HRH3Q9Y5N1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 RNU6-834P-201ENST00000362367 110 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 SNORA73.1-201ENST00000363107 205 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 RNA5SP28-201ENST00000363841 119 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 RNU6-153P-201ENST00000364422 104 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 Y_RNA.287-201ENST00000364853 94 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 SNORD37.2-201ENST00000391075 66 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 U3.30-201ENST00000391308 210 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 MIR208B-201ENST00000401172 77 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 RNU6-710P-201ENST00000410424 105 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 BX510359.2-201ENST00000417920 305 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 AC073264.2-201ENST00000448886 166 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 RNU6-436P-201ENST00000516171 114 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 AC136628.3-201ENST00000521868 290 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 DEFB131C-201ENST00000528817 165 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 MIR3667-201ENST00000581025 74 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 AL391358.1-201ENST00000605342 190 ntBASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.47□□□□□ -1.69
HRH3Q9Y5N1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HRH3Q9Y5N1 SDAD1P1-202ENST00000524156 2051 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 RNU6-1264P-201ENST00000383891 107 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 RPS16P5-201ENST00000406501 404 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 RPL23AP58-201ENST00000440453 469 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 AC090525.1-201ENST00000479116 478 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 YWHAEP4-201ENST00000505390 198 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 Y_RNA.686-201ENST00000516548 134 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 AC091042.1-201ENST00000579213 173 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 MIR3136-201ENST00000583498 78 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 AC005255.1-201ENST00000593748 216 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 AC013791.1-201ENST00000616619 62 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 AL133243.3-201ENST00000617415 3004 ntBASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HRH3Q9Y5N1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HRH3Q9Y5N1 AL136964.1-201ENST00000622038 2990 ntBASIC4.45□□□□□ -1.7
HRH3Q9Y5N1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HRH3Q9Y5N1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HRH3Q9Y5N1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms