Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHB1Q9Y5F3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 KPNA2P1-201ENST00000458289 1591 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC110491.1-201ENST00000562191 2010 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC073073.2-201ENST00000609827 2578 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC007256.1-201ENST00000392253 2765 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 Y_RNA.151-201ENST00000363566 112 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-827P-201ENST00000365553 106 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 Y_RNA.473-201ENST00000384333 102 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-790P-201ENST00000384479 105 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 MIR517A-201ENST00000385001 87 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AL117339.3-201ENST00000418733 162 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC005326.1-201ENST00000429197 123 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 DAP3P1-201ENST00000441522 278 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC124916.1-201ENST00000444020 547 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC013470.1-201ENST00000453438 462 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 MIR2053-201ENST00000459295 91 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC097473.1-201ENST00000508142 408 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC010186.2-204ENST00000537668 439 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 TRAV32-201ENST00000553993 340 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AL391261.3-201ENST00000557194 520 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC008737.2-201ENST00000599446 118 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC018889.1-201ENST00000605372 397 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AL355802.3-201ENST00000607571 545 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 MIR7851-201ENST00000610611 160 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 AC004852.3-201ENST00000614131 326 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB1Q9Y5F3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 MTND4P1-201ENST00000457501 1466 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 RPL9P7-201ENST00000330965 580 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-306P-201ENST00000384617 107 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 MIR518D-201ENST00000385014 87 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 Y_RNA.594-201ENST00000410373 140 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 BPY2DP-201ENST00000422208 265 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC005300.1-201ENST00000428401 373 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC236972.1-201ENST00000433225 199 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AL513043.1-201ENST00000439124 535 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 U8.21-201ENST00000459536 136 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 RPL9P9-202ENST00000466501 579 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC008571.1-201ENST00000467232 300 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC114801.2-201ENST00000503825 781 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AK3P2-201ENST00000507976 429 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-307P-201ENST00000516743 106 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC026333.2-201ENST00000542164 106 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 CPDP1-201ENST00000579660 283 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC024153.1-201ENST00000603103 365 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AL121917.1-203ENST00000605534 577 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AL121655.1-201ENST00000605811 308 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC009229.3-201ENST00000608056 282 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 U7.8-201ENST00000619968 63 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 AC022149.2-201ENST00000621061 203 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 uc_338.22-201ENST00000622722 187 ntBASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PCDHB1Q9Y5F3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 Y_RNA.202-201ENST00000364083 110 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-596P-201ENST00000365395 98 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-898P-201ENST00000365627 104 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 Y_RNA.395-201ENST00000383945 109 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-574P-201ENST00000384265 107 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-310P-201ENST00000384655 107 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 RNA5SP38-201ENST00000410750 119 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 RNU6-325P-201ENST00000411132 105 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 USP9YP30-201ENST00000430729 455 ntBASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDHB1Q9Y5F3 AL357552.1-201ENST00000445254 415 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms