Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SNORD14B-201ENST00000364533 90 ntBASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 SNORD116-20-201ENST00000384529 92 ntBASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 RNA5SP182-201ENST00000516064 82 ntBASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 MIR548AC-201ENST00000585049 88 ntBASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 AL158050.2-201ENST00000605336 568 ntBASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 AL139022.2-201ENST00000606934 443 ntBASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 AC009318.2-201ENST00000610917 651 ntBASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 AC091834.1-201ENST00000614543 472 ntBASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 Y_RNA.302-201ENST00000364997 102 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 RNU6-157P-201ENST00000383957 107 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 MIR10A-201ENST00000385043 110 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 SNORA40.18-201ENST00000391200 128 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 BTF3L4P2-201ENST00000392798 346 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 MIR1294-201ENST00000408503 142 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 AC074117.2-201ENST00000417130 397 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 RPL22P18-201ENST00000417197 377 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 AC137499.1-201ENST00000427602 88 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 MTND1P32-201ENST00000433043 938 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 CALM1P1-201ENST00000442082 433 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 AC068587.2-201ENST00000478386 781 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 AC112206.3-201ENST00000514578 389 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 AP005660.1-201ENST00000522972 293 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 TRAV32-201ENST00000553993 340 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 BNIP3P40-201ENST00000596017 556 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 AP002360.4-201ENST00000606980 481 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 AL391813.2-201ENST00000609113 322 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 AC004908.3-201ENST00000610248 625 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 AC013412.1-201ENST00000610687 192 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.53□□□□□ -2.16
RHBDD3Q9Y3P4 MTND4P16-201ENST00000466108 1367 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 RNU6-661P-201ENST00000362409 107 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 RNU6-212P-201ENST00000362642 104 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 RNY4P16-201ENST00000364768 94 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 MIR597-201ENST00000384968 97 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 SNORA48.1-201ENST00000390879 135 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 PGBD4P6-201ENST00000421501 610 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 RPL22P17-201ENST00000438729 315 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 snoU109.2-201ENST00000459316 135 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 UBL5P3-201ENST00000475112 231 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 MTCYBP40-201ENST00000509390 1135 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 AC022616.6-201ENST00000520479 119 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 AC107934.1-201ENST00000522215 217 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 DEFB122-202ENST00000569013 197 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 MIR3618-201ENST00000580330 88 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 RNU4-5P-201ENST00000607255 135 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 AC009269.6-201ENST00000621778 588 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 AC006927.4-201ENST00000639187 543 ntBASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.52□□□□□ -2.17
RHBDD3Q9Y3P4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 Y_RNA.18-201ENST00000362461 102 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 MIR583-201ENST00000384846 75 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 RAP1BP3-201ENST00000407180 549 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 OR9R1P-201ENST00000412200 877 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 RPS20P15-201ENST00000412792 311 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 AL590556.1-201ENST00000423231 483 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 AL645568.3-201ENST00000433683 316 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 RPL37P21-201ENST00000435890 276 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 FDX1P2-201ENST00000450769 375 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 MTATP6P14-201ENST00000455189 673 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 ADI1P3-201ENST00000549509 470 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 AC137800.2-201ENST00000574375 120 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 AC123912.5-201ENST00000605470 343 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 AL157392.4-201ENST00000609756 345 ntBASIC1.51□□□□□ -2.17
RHBDD3Q9Y3P4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 MIR126-201ENST00000362291 85 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 Y_RNA.40-201ENST00000362645 93 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 SNORD3E-201ENST00000362899 217 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 RNU6-944P-201ENST00000364023 107 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 BTF3L4P1-201ENST00000413813 468 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 RPL23AP39-201ENST00000415533 405 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 RPS27AP14-201ENST00000422868 454 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 MTCYBP5-201ENST00000423752 1135 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 MTND4P20-201ENST00000424125 869 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms