Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SNORA26.8-201ENST00000391306 124 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 RPS4XP8-201ENST00000402039 771 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 RNA5SP338-201ENST00000410495 85 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-607P-201ENST00000411283 108 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 OR9R1P-201ENST00000412200 877 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 TOMM20P4-201ENST00000427861 435 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 HMGB1P31-201ENST00000437242 427 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 AC080014.1-201ENST00000496877 1201 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 MTND3P25-201ENST00000509243 135 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 SNORD27.1-201ENST00000516319 72 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 AC060788.1-201ENST00000521318 469 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 GTF3AP2-201ENST00000557014 266 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 AF131215.7-201ENST00000602443 707 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 ELOCP5-201ENST00000604924 333 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 AC011155.2-201ENST00000623202 216 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 AC110994.2-201ENST00000635481 492 ntBASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
KCNIP3Q9Y2W7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AL354685.2-201ENST00000448218 1447 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-78P-201ENST00000362897 107 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-1097P-201ENST00000363586 107 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 MIR454-201ENST00000390180 115 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-550P-201ENST00000391057 101 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 CBX3P9-201ENST00000402326 552 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 NDUFB4P4-201ENST00000404822 243 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-248P-201ENST00000410720 107 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AC018634.1-201ENST00000437554 401 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AC107083.1-201ENST00000439643 279 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 RPL23AP7-203ENST00000449021 469 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 RNA5SP269-201ENST00000459032 137 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 RN7SL636P-201ENST00000497504 294 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 HMGB3P17-201ENST00000504195 649 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 MTCYBP40-201ENST00000509390 1135 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 OR5AL2P-201ENST00000532185 920 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AC012414.6-201ENST00000568241 401 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 MIR3944-201ENST00000581277 108 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 MIR5002-201ENST00000584713 97 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 MIR6817-201ENST00000615588 66 ntBASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.78□□□□□ -2.12
KCNIP3Q9Y2W7 AC002543.1-201ENST00000299783 1954 ntBASIC1.78□□□□□ -2.13
KCNIP3Q9Y2W7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 RNU6-7-201ENST00000364784 107 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 RNU6-8-201ENST00000365467 107 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 RNU6-116P-201ENST00000384042 109 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 RNU6-1274P-201ENST00000384557 107 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 MIR221-201ENST00000385135 110 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 RNU2-48P-201ENST00000410694 191 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 CYCSP33-201ENST00000414485 327 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 C1DP2-201ENST00000418167 426 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 MTND2P18-201ENST00000419962 1030 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 RPL31P35-201ENST00000431058 377 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 RPL23AP83-201ENST00000434984 473 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 USP9YP8-201ENST00000441913 500 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 SNRPGP9-201ENST00000456025 225 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 RNA5SP148-201ENST00000516527 94 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 RN7SKP256-201ENST00000517201 314 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 AC064872.1-201ENST00000604823 1072 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 MIR98-201ENST00000606724 119 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 AL159153.1-201ENST00000619688 317 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 AP003485.2-201ENST00000623636 610 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 U6.114-201ENST00000636407 96 ntBASIC1.77□□□□□ -2.13
KCNIP3Q9Y2W7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KCNIP3Q9Y2W7 SNORD56.1-201ENST00000362913 68 ntBASIC1.76□□□□□ -2.13
KCNIP3Q9Y2W7 RNU6-1159P-201ENST00000362933 107 ntBASIC1.76□□□□□ -2.13
KCNIP3Q9Y2W7 Y_RNA.169-201ENST00000363745 96 ntBASIC1.76□□□□□ -2.13
KCNIP3Q9Y2W7 SNORA62.1-201ENST00000364287 154 ntBASIC1.76□□□□□ -2.13
KCNIP3Q9Y2W7 RNY3P10-201ENST00000384764 102 ntBASIC1.76□□□□□ -2.13
KCNIP3Q9Y2W7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
KCNIP3Q9Y2W7 BTF3P7-201ENST00000407097 488 ntBASIC1.76□□□□□ -2.13
KCNIP3Q9Y2W7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.76□□□□□ -2.13
KCNIP3Q9Y2W7 BTF3L4P1-201ENST00000413813 468 ntBASIC1.76□□□□□ -2.13
KCNIP3Q9Y2W7 USP9YP18-201ENST00000425912 695 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms