Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU6-1245P-201ENST00000411130 106 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 EIF1AXP1-201ENST00000419267 435 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 VDAC1P3-201ENST00000434069 851 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 POLR2KP2-201ENST00000438155 177 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 MRPS10P1-201ENST00000448483 130 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 SNRPGP7-201ENST00000469016 106 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 AF186996.7-201ENST00000492781 209 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 AK6P2-201ENST00000549020 471 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 RPL21P9-201ENST00000556149 474 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 AC008749.1-201ENST00000597650 306 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 AC011921.3-201ENST00000605540 361 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 AC090132.2-201ENST00000615881 347 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 AL354798.1-201ENST00000622505 329 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 MIR6500-201ENST00000622700 86 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 AC018529.3-201ENST00000624212 2254 ntBASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 AC016588.2-201ENST00000632484 3021 ntBASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 USP8P1-201ENST00000494673 3183 ntBASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 AC008079.2-201ENST00000623543 20396 ntBASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 RNA5SP175-201ENST00000364275 119 ntBASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 SNORD50B-201ENST00000364995 70 ntBASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 RPL23AP3-201ENST00000453844 468 ntBASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ZC3H4Q9UPT8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 AL353743.1-202ENST00000431724 1695 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 RNU6-626P-201ENST00000363354 107 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 SNORD50.2-201ENST00000365465 70 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 RNU6-20P-201ENST00000384106 107 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 SNORA46.1-201ENST00000391069 153 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 RNA5SP146-201ENST00000410743 123 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 RNU6-1001P-201ENST00000411265 100 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 AC024067.1-201ENST00000426199 223 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 WARS2P1-201ENST00000429678 537 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 SETP5-201ENST00000437270 562 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 AC007395.1-201ENST00000451333 677 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 AC006026.2-201ENST00000457376 180 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 AC091874.1-201ENST00000511402 339 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 RNU6-1219P-201ENST00000516143 112 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 SNORA43.2-201ENST00000516652 128 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 RNU6-567P-201ENST00000516746 107 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 AC011471.1-201ENST00000585766 187 ntBASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.19□□□□□ -1.58
ZC3H4Q9UPT8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 AL359693.1-201ENST00000614959 2407 ntBASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 MIR410-201ENST00000362222 80 ntBASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 RNU6-1175P-201ENST00000365200 107 ntBASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 RNA5SP22-201ENST00000365393 109 ntBASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 SNORA57.3-201ENST00000411095 141 ntBASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 AC096638.1-201ENST00000444678 216 ntBASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 SSXP4-201ENST00000451349 245 ntBASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 UBE2CP3-201ENST00000502715 450 ntBASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 AP004607.1-201ENST00000524456 203 ntBASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 UBL5P4-201ENST00000562584 236 ntBASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 MIR4282-201ENST00000583613 67 ntBASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.18□□□□□ -1.58
ZC3H4Q9UPT8 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ZC3H4Q9UPT8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms