Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC104985.2-201ENST00000620598 500 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 AC009831.4-201ENST00000620744 325 ntBASIC2.57□□□□□ -2
CLIP2Q9UDT6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.57□□□□□ -2
CLIP2Q9UDT6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLIP2Q9UDT6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLIP2Q9UDT6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 Y_RNA.409-201ENST00000383990 98 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLIP2Q9UDT6 AL023284.1-201ENST00000403956 276 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 SNORA11.4-201ENST00000408823 129 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 RNU4-26P-201ENST00000410270 107 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 BX295541.1-201ENST00000417774 250 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLIP2Q9UDT6 Z98742.2-201ENST00000431564 187 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 RPL22P17-201ENST00000438729 315 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 HMGB3P12-201ENST00000438745 556 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 HMGN2P10-201ENST00000448085 265 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 MTND1P12-201ENST00000455231 147 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 RPL39P36-201ENST00000490784 156 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC074344.1-201ENST00000512823 224 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 RNA5SP200-201ENST00000516360 103 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 SNORA18.6-201ENST00000516792 115 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 Y_RNA.704-201ENST00000516851 102 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC022616.6-201ENST00000520479 119 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC107934.1-201ENST00000522215 217 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC009977.1-201ENST00000586015 570 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC007363.1-201ENST00000604736 620 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLIP2Q9UDT6 MIR6715A-201ENST00000615929 79 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 AL008636.1-201ENST00000625038 1018 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC093591.3-201ENST00000634516 308 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 MIR3199-2-201ENST00000636243 86 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CLIP2Q9UDT6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLIP2Q9UDT6 AC099654.14-201ENST00000638599 341 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 MTND4P27-201ENST00000450813 1354 ntBASIC2.56□□□□□ -2
CLIP2Q9UDT6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLIP2Q9UDT6 NACAP2-201ENST00000318548 624 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLIP2Q9UDT6 SNORA72.1-201ENST00000363485 129 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 RNU6-188P-201ENST00000364207 107 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 Y_RNA.813-201ENST00000364639 102 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 Y_RNA.450-201ENST00000384198 113 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 RNU6-1042P-201ENST00000384204 107 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 AL079342.1-201ENST00000401460 267 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 AL353729.1-201ENST00000425044 720 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 GAPDHP17-201ENST00000449858 1001 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 USP9YP12-201ENST00000450481 570 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 RNU6-953P-201ENST00000459154 107 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 PRDX4P1-201ENST00000507189 574 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 IGKV3-31-201ENST00000523109 329 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 ARL2BPP2-201ENST00000550907 489 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 ANP32BP3-201ENST00000559213 706 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 AC021739.1-201ENST00000559631 174 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 SNORA59B-202ENST00000578183 701 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 MIR3118-1-201ENST00000581787 76 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 AC091135.1-201ENST00000585943 307 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 AC104984.5-201ENST00000586878 94 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 AC008250.2-201ENST00000615261 205 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 U4.5-201ENST00000617137 123 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 AC124864.2-201ENST00000624736 186 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 MIR6863-201ENST00000636112 90 ntBASIC2.55□□□□□ -2
CLIP2Q9UDT6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.55□□□□□ -2
CLIP2Q9UDT6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLIP2Q9UDT6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CLIP2Q9UDT6 MTND4P35-201ENST00000604257 1375 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLIP2Q9UDT6 Y_RNA.38-201ENST00000362617 102 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 RNU5E-6P-201ENST00000365574 115 ntBASIC2.54□□□□□ -2
CLIP2Q9UDT6 Y_RNA.381-201ENST00000365666 102 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms