Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 HIGD1AP17-201ENST00000554576 276 ntBASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 AC044913.1-201ENST00000557200 430 ntBASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 AC005786.1-201ENST00000588553 154 ntBASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 DPPA3P3-201ENST00000603842 430 ntBASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 AL391646.1-201ENST00000603860 190 ntBASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 AC112220.3-201ENST00000605502 502 ntBASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 AC005332.6-201ENST00000613178 446 ntBASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 MIR6857-201ENST00000613267 93 ntBASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 AC068205.3-201ENST00000636385 468 ntBASIC0.61□□□□□ -2.31
COMMD3Q9UBI1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 RNA5SP493-201ENST00000364115 91 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 RNU6-898P-201ENST00000365627 104 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 RNU6-1065P-201ENST00000384513 106 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 RNU6-160P-201ENST00000384591 107 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 RNU6-296P-201ENST00000384608 107 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 MRPL35P1-201ENST00000404272 572 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 DPRXP1-201ENST00000426312 460 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AL589872.1-201ENST00000426602 288 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 FTH1P12-201ENST00000432137 551 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 MTCYBP15-201ENST00000433123 1127 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 MTND4P6-201ENST00000438297 472 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 MTND2P4-201ENST00000445034 1004 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 RNU7-136P-201ENST00000458819 69 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AC010631.1-201ENST00000474150 156 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 RNA5SP458-201ENST00000516188 119 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 RNU6-390P-201ENST00000516259 103 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AC093012.1-202ENST00000549403 582 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AC136618.2-201ENST00000575091 400 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 snoU13.31-201ENST00000607291 104 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 MIR6715A-201ENST00000615929 79 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AC093648.1-201ENST00000623546 606 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 AC107982.1-201ENST00000507171 1300 ntBASIC0.6□□□□□ -2.31
COMMD3Q9UBI1 Y_RNA.255-201ENST00000364581 97 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 RNU6-53P-201ENST00000365367 106 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 RNU6-487P-201ENST00000365430 104 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 SNORA25-201ENST00000384384 134 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 RNU6-360P-201ENST00000390944 104 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AC104651.1-201ENST00000427559 735 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AL669831.1-202ENST00000428504 417 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AL592045.1-201ENST00000429867 352 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AC117454.1-201ENST00000491120 168 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 SCARNA16.2-201ENST00000516520 172 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AC023538.1-201ENST00000534576 736 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 OR6C7P-201ENST00000547875 934 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AC126365.2-201ENST00000580630 379 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AL022345.2-201ENST00000606307 135 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 BX284668.6-201ENST00000606899 438 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AL021879.1-201ENST00000611756 288 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 uc_338.15-201ENST00000615470 191 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AC009269.6-201ENST00000621778 588 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AC009033.1-201ENST00000624279 431 ntBASIC0.59□□□□□ -2.31
COMMD3Q9UBI1 AC100821.1-201ENST00000523153 2479 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 RNU6-944P-201ENST00000364023 107 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 RNU6-743P-201ENST00000364151 106 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 SNORA4.1-201ENST00000364263 144 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 SNORD65.1-201ENST00000390889 71 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 RNU6-952P-201ENST00000391164 108 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 RNU11-5P-201ENST00000391216 129 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 RPL23AP32-201ENST00000395315 459 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 FTH1P15-201ENST00000406984 280 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 C8orf59P1-201ENST00000429930 303 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 AL096829.2-201ENST00000446582 742 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 BTF3P15-201ENST00000455606 336 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 RNU6-965P-201ENST00000516721 96 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 AC009902.1-201ENST00000519351 183 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 SLC2A13P1-201ENST00000531560 322 ntBASIC0.58□□□□□ -2.32
COMMD3Q9UBI1 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms