Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MICF-203ENST00000432679 129 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 AC006028.1-201ENST00000438379 402 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 AL513043.1-201ENST00000439124 535 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 RPL7P12-201ENST00000446719 750 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRFN1Q9P244 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.1□□□□□ -1.91
LRFN1Q9P244 AP001025.1-201ENST00000486139 332 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.1□□□□□ -1.91
LRFN1Q9P244 SNORA70.19-201ENST00000516717 90 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.1□□□□□ -1.91
LRFN1Q9P244 AC025423.5-201ENST00000550230 219 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.1□□□□□ -1.91
LRFN1Q9P244 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.1□□□□□ -1.91
LRFN1Q9P244 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.1□□□□□ -1.91
LRFN1Q9P244 AC100830.2-201ENST00000581636 240 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 AC012493.2-201ENST00000595083 291 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 AL121917.1-203ENST00000605534 577 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRFN1Q9P244 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.1□□□□□ -1.91
LRFN1Q9P244 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LRFN1Q9P244 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRFN1Q9P244 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.09□□□□□ -1.91
LRFN1Q9P244 RNA5SP197-201ENST00000363357 119 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 RNU6-1013P-201ENST00000384180 107 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 RNU6-622P-201ENST00000384272 103 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 RNU6-1106P-201ENST00000390845 107 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 SNORA48.5-201ENST00000391143 135 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 RPS29P13-201ENST00000402041 169 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 RPL35AP12-201ENST00000425362 338 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 AC012308.1-201ENST00000451232 178 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.09□□□□□ -1.91
LRFN1Q9P244 RPL23AP67-201ENST00000465341 474 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 AC133134.1-201ENST00000466800 359 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 AC110794.1-201ENST00000505816 425 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 RN7SKP256-201ENST00000517201 314 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.09□□□□□ -1.91
LRFN1Q9P244 AP006245.1-201ENST00000522549 120 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.09□□□□□ -1.91
LRFN1Q9P244 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
LRFN1Q9P244 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.09□□□□□ -1.91
LRFN1Q9P244 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.09□□□□□ -1.91
LRFN1Q9P244 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.09□□□□□ -1.91
LRFN1Q9P244 AL162713.1-201ENST00000604480 262 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 Y_RNA.804-201ENST00000615262 101 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 MIR7112-201ENST00000616126 65 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 AC022149.2-201ENST00000621061 203 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 MIR7515-201ENST00000637837 67 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 MTND5P30-201ENST00000452896 1731 ntBASIC3.09□□□□□ -1.91
LRFN1Q9P244 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRFN1Q9P244 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
LRFN1Q9P244 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
LRFN1Q9P244 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
LRFN1Q9P244 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LRFN1Q9P244 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 AL359854.1-201ENST00000614203 1594 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRFN1Q9P244 FAM35CP-201ENST00000554755 2470 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 AL356274.2-201ENST00000624379 3752 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 RNU6-1329P-201ENST00000365664 107 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 RNU6-214P-201ENST00000384130 107 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 SNORD73A-201ENST00000386062 65 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 VN1R36P-201ENST00000414936 291 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 AL031274.1-201ENST00000450334 232 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 AC091179.1-201ENST00000461606 579 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 RPL23AP49-201ENST00000492925 468 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 RNU6-864P-201ENST00000516256 108 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 CKS1BP7-201ENST00000522230 235 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 MIR5680-201ENST00000577577 84 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 AL137843.1-201ENST00000605078 385 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 AC104985.2-201ENST00000620598 500 ntBASIC3.08□□□□□ -1.92
LRFN1Q9P244 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.08□□□□□ -1.92
LRFN1Q9P244 AL513302.2-201ENST00000562313 1842 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LRFN1Q9P244 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LRFN1Q9P244 RNU6-428P-201ENST00000362942 107 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 Y_RNA.135-201ENST00000363439 95 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 RNU6-336P-201ENST00000364891 107 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 RNU6-827P-201ENST00000365553 106 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 RNU6-767P-201ENST00000384132 107 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 RNU6-1009P-201ENST00000390996 107 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRFN1Q9P244 RNA5SP390-201ENST00000410191 113 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 RNU6-1328P-201ENST00000410938 106 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.07□□□□□ -1.92
LRFN1Q9P244 UBE2V1P4-201ENST00000425374 344 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 MTCO3P46-201ENST00000425787 232 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 AL591043.1-201ENST00000432461 424 ntBASIC3.07□□□□□ -1.92
LRFN1Q9P244 RPS15AP7-201ENST00000439294 405 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms