Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 RNU6-658P-201ENST00000384606 106 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 MIR34A-201ENST00000385130 110 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 RNY4P36-201ENST00000391116 96 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 RNA5SP120-201ENST00000410900 112 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 AC016831.2-201ENST00000417179 352 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 UBE2V1P4-201ENST00000425374 344 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 AC098614.2-201ENST00000426040 255 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 AC005326.1-201ENST00000429197 123 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 NDUFB1P2-201ENST00000449477 176 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 RPL30P15-201ENST00000457129 321 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 snoU109.2-201ENST00000459316 135 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 RNU6-1170P-201ENST00000515974 106 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 RNU1-103P-201ENST00000516502 125 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 SNORA70.19-201ENST00000516717 90 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 CBX3P7-201ENST00000532876 502 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 AC010653.1-201ENST00000571108 881 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 MIR4782-201ENST00000577987 79 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 AC011471.1-201ENST00000585766 187 ntBASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.6□□□□□ -1.83
CALCOCO1Q9P1Z2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 RNA5SP197-201ENST00000363357 119 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 RNU6-884P-201ENST00000363889 107 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 RNU6-306P-201ENST00000384617 107 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 RPS4XP3-201ENST00000398541 413 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 MIR1302-11-201ENST00000408051 138 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 MIR1302-9-201ENST00000408365 138 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 MIR1302-10-201ENST00000408734 138 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AC245054.2-201ENST00000415639 319 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 HMGN2P30-201ENST00000423237 256 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AL031274.1-201ENST00000450334 232 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AC116337.1-201ENST00000509680 687 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AC006445.2-201ENST00000510061 472 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 RNA5SP217-201ENST00000515959 91 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 RNU1-143P-201ENST00000516296 146 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AP000889.1-201ENST00000530968 660 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AC005476.1-201ENST00000554427 397 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AC080078.3-201ENST00000605407 463 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 MIR1302-2-201ENST00000607096 138 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AC064836.2-201ENST00000609491 462 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 U1.23-201ENST00000610293 146 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 RNU1-68P-201ENST00000615382 146 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 AC090971.5-201ENST00000621102 293 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 U1.39-201ENST00000621562 146 ntBASIC3.59□□□□□ -1.83
CALCOCO1Q9P1Z2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 SNORD62.1-201ENST00000362541 86 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU6-43P-201ENST00000384302 107 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU6-293P-201ENST00000411259 106 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 RPL32P35-201ENST00000415214 394 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AL354751.2-201ENST00000415471 210 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AL353729.1-201ENST00000425044 720 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AC005300.1-201ENST00000428401 373 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AC115115.1-201ENST00000449927 248 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU7-187P-201ENST00000458985 68 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 Y_RNA.653-201ENST00000459091 95 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 RN7SL807P-201ENST00000470923 297 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 HMGN2P13-201ENST00000476476 274 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AC027575.1-201ENST00000481064 460 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AC018437.1-201ENST00000492214 406 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU6-1016P-201ENST00000516689 94 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU6-1213P-201ENST00000517075 94 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AC107934.2-201ENST00000518653 310 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 ANP32BP3-201ENST00000559213 706 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 H3F3AP1-201ENST00000559984 334 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AL355598.1-201ENST00000604169 202 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 AC008962.1-201ENST00000605729 304 ntBASIC3.58□□□□□ -1.84
CALCOCO1Q9P1Z2 PISRT1.1-201ENST00000616930 107 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms