Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AL589994.2-201ENST00000621124 579 ntBASIC2.09□□□□□ -2.07
HOXC10Q9NYD6 AC131159.1-201ENST00000621854 213 ntBASIC2.09□□□□□ -2.07
HOXC10Q9NYD6 Z99571.1-201ENST00000636677 394 ntBASIC2.09□□□□□ -2.07
HOXC10Q9NYD6 AC073343.1-201ENST00000328239 651 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 RNU6-553P-201ENST00000364047 96 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 SNORA4.3-201ENST00000365564 137 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 RNU6-19P-201ENST00000384718 107 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AL031577.2-201ENST00000404133 280 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 PTGES3P4-201ENST00000426243 356 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AL591212.2-201ENST00000433923 257 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 EPS15P1-201ENST00000448836 336 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 RPS29P11-201ENST00000496507 171 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 FABP5P5-201ENST00000515537 406 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 Y_RNA.676-201ENST00000516393 96 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AC106038.2-201ENST00000520706 568 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 MIR4255-201ENST00000579351 72 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AC073544.2-201ENST00000601155 540 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AP001981.2-201ENST00000603241 418 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AC112191.3-201ENST00000604371 277 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AL022154.1-201ENST00000604698 785 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AC092354.1-201ENST00000606057 376 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 RNU6-91P-201ENST00000607774 107 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AC138627.2-201ENST00000624202 601 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 AC008993.2-201ENST00000631744 806 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 MTND4P4-201ENST00000439033 1366 ntBASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HOXC10Q9NYD6 SNORD56.2-201ENST00000363242 71 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 RNU6-288P-201ENST00000363690 104 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 SNORA67.5-201ENST00000391036 107 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 HMGN2P39-201ENST00000398005 273 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AL033519.2-201ENST00000403958 392 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 FCF1P10-201ENST00000407590 479 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 RPL23AP36-201ENST00000413895 458 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AL365203.2-201ENST00000423444 196 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 TAF9P1-201ENST00000445421 515 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 ZNF114P1-201ENST00000453500 292 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 TAF9P2-201ENST00000454958 515 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 SNRPFP4-201ENST00000456366 242 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AL139824.2-201ENST00000458731 1095 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 SNORD13-201ENST00000459299 104 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AC018437.1-201ENST00000492214 406 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AC010587.1-201ENST00000505809 469 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AP003181.2-201ENST00000528941 181 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 OR11H5P-201ENST00000554039 926 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 HSBP1P1-201ENST00000555205 166 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AC008015.1-201ENST00000555505 465 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AL121821.2-201ENST00000556081 394 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AL157871.3-201ENST00000557231 293 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 MTATP6P24-201ENST00000576835 677 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 MIR4782-201ENST00000577987 79 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 MIR8081-201ENST00000611533 95 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AC091304.9-201ENST00000612091 226 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 AC027807.2-201ENST00000616099 408 ntBASIC2.07□□□□□ -2.08
HOXC10Q9NYD6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 RNU6-457P-201ENST00000363999 107 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 RNU6-166P-201ENST00000384371 107 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 SNORD56-201ENST00000413522 71 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 RPS15AP12-201ENST00000419498 388 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 NDUFB1P2-201ENST00000449477 176 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 USP9YP12-201ENST00000450481 570 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 AC117503.1-201ENST00000472241 394 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 AC117532.1-201ENST00000514638 323 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 SNORA31.19-201ENST00000517079 126 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 RNU6-232P-201ENST00000517144 64 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 SNORA31.23-201ENST00000517219 133 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 ANP32BP3-201ENST00000559213 706 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 AL031274.2-201ENST00000599419 203 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 MIR502-201ENST00000606349 86 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 MIR15A-201ENST00000607334 83 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 AL512643.1-201ENST00000635735 524 ntBASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HOXC10Q9NYD6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC10Q9NYD6 Y_RNA.33-201ENST00000362591 102 ntBASIC2.05□□□□□ -2.08
HOXC10Q9NYD6 SNORA16.1-201ENST00000364597 132 ntBASIC2.05□□□□□ -2.08
HOXC10Q9NYD6 RNU6-395P-201ENST00000365662 106 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms