Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 uc_338.13-201ENST00000618243 179 ntBASIC3.72□□□□□ -1.81
GCM1Q9NP62 AC006001.4-201ENST00000622243 395 ntBASIC3.72□□□□□ -1.81
GCM1Q9NP62 AC007546.2-201ENST00000623996 360 ntBASIC3.72□□□□□ -1.81
GCM1Q9NP62 SCARNA4-202ENST00000625402 129 ntBASIC3.72□□□□□ -1.81
GCM1Q9NP62 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
GCM1Q9NP62 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.72□□□□□ -1.81
GCM1Q9NP62 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
GCM1Q9NP62 AL079305.1-201ENST00000623159 3008 ntBASIC3.72□□□□□ -1.81
GCM1Q9NP62 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
GCM1Q9NP62 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
GCM1Q9NP62 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
GCM1Q9NP62 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
GCM1Q9NP62 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
GCM1Q9NP62 AL353743.1-202ENST00000431724 1695 ntBASIC3.71□□□□□ -1.81
GCM1Q9NP62 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
GCM1Q9NP62 USP8P1-201ENST00000494673 3183 ntBASIC3.71□□□□□ -1.81
GCM1Q9NP62 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
GCM1Q9NP62 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
GCM1Q9NP62 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.81
GCM1Q9NP62 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.71□□□□□ -1.82
GCM1Q9NP62 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
GCM1Q9NP62 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GCM1Q9NP62 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
GCM1Q9NP62 MIR331-201ENST00000362302 94 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 RNA5SP28-201ENST00000363841 119 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 RNU6-105P-201ENST00000363909 104 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 RNU6-1175P-201ENST00000365200 107 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 RNU1-44P-201ENST00000384453 163 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 RNU6-541P-201ENST00000384709 110 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 SNORA11F-201ENST00000408237 128 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 Y_RNA.597-201ENST00000410463 100 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.71□□□□□ -1.82
GCM1Q9NP62 RPS29P17-201ENST00000430795 166 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 CYCSP32-201ENST00000440548 321 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 MRPS10P1-201ENST00000448483 130 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 AC009220.1-201ENST00000451614 275 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 ANP32BP2-201ENST00000454525 545 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 RPL23AP49-201ENST00000492925 468 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 AC139453.3-201ENST00000493276 369 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.71□□□□□ -1.82
GCM1Q9NP62 SNORA40.9-201ENST00000515895 93 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.71□□□□□ -1.82
GCM1Q9NP62 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GCM1Q9NP62 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.71□□□□□ -1.82
GCM1Q9NP62 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.71□□□□□ -1.82
GCM1Q9NP62 MIR5692C2-201ENST00000577959 77 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.71□□□□□ -1.82
GCM1Q9NP62 AL160290.3-201ENST00000604869 165 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 AC113403.1-201ENST00000604910 193 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 AC005828.6-201ENST00000606610 232 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 AC091979.2-201ENST00000607514 214 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.71□□□□□ -1.82
GCM1Q9NP62 AL365222.1-201ENST00000614661 98 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 AC005296.1-201ENST00000616145 209 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 AC084757.4-201ENST00000616350 526 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 AC004825.2-201ENST00000616634 455 ntBASIC3.71□□□□□ -1.82
GCM1Q9NP62 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.71□□□□□ -1.82
GCM1Q9NP62 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.71□□□□□ -1.82
GCM1Q9NP62 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GCM1Q9NP62 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
GCM1Q9NP62 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GCM1Q9NP62 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
GCM1Q9NP62 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GCM1Q9NP62 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GCM1Q9NP62 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GCM1Q9NP62 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.7□□□□□ -1.82
GCM1Q9NP62 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GCM1Q9NP62 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GCM1Q9NP62 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GCM1Q9NP62 RNU1-20P-201ENST00000363314 162 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 RNA5SP509-201ENST00000364577 119 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 Y_RNA.331-201ENST00000365267 102 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 RNU6-72P-201ENST00000384285 79 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 MIR141-201ENST00000384975 95 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 RNA5SP146-201ENST00000410743 123 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 CRYBB2P1-203ENST00000415709 538 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 AC024067.1-201ENST00000426199 223 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.7□□□□□ -1.82
GCM1Q9NP62 NUTF2P7-201ENST00000453086 375 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.7□□□□□ -1.82
GCM1Q9NP62 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.7□□□□□ -1.82
GCM1Q9NP62 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.7□□□□□ -1.82
GCM1Q9NP62 AC108043.1-201ENST00000512696 574 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 RNU6-1256P-201ENST00000516539 103 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.7□□□□□ -1.82
GCM1Q9NP62 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.7□□□□□ -1.82
GCM1Q9NP62 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.7□□□□□ -1.82
GCM1Q9NP62 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.7□□□□□ -1.82
GCM1Q9NP62 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
GCM1Q9NP62 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GCM1Q9NP62 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GCM1Q9NP62 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.7□□□□□ -1.82
GCM1Q9NP62 AL359693.1-201ENST00000614959 2407 ntBASIC3.7□□□□□ -1.82
GCM1Q9NP62 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.69□□□□□ -1.82
GCM1Q9NP62 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GCM1Q9NP62 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GCM1Q9NP62 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GCM1Q9NP62 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GCM1Q9NP62 RNU6-527P-201ENST00000363425 104 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms