Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATP13A1Q9HD20 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.13□□□□□ -1.75
ATP13A1Q9HD20 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.13□□□□□ -1.75
ATP13A1Q9HD20 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 Y_RNA.44-201ENST00000362676 108 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 RNA5SP515-201ENST00000364570 118 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 SNORA40C-201ENST00000391285 128 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 AL033519.2-201ENST00000403958 392 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 PPIAP31-201ENST00000405422 495 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 AL358453.1-201ENST00000422522 250 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 EIF1P2-201ENST00000428233 350 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 AC074198.2-201ENST00000508153 258 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 AC023141.12-201ENST00000512399 199 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 RNU6-377P-201ENST00000515965 102 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 SCARNA15.2-201ENST00000516409 127 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 AC011476.5-201ENST00000615594 130 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.12□□□□□ -1.75
ATP13A1Q9HD20 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 DEFB108F-201ENST00000344638 222 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 Y_RNA.122-201ENST00000363331 96 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 Y_RNA.170-201ENST00000363746 110 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 SNORD74.4-201ENST00000364129 80 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 RNU6-173P-201ENST00000364215 104 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 RNU4-9P-201ENST00000364951 139 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 RNY1P5-201ENST00000383890 115 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 Y_RNA.504-201ENST00000384481 104 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 MIR34A-201ENST00000385130 110 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 RPS26P21-201ENST00000475397 348 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 MRPL42P6-201ENST00000486397 371 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 AL160314.1-201ENST00000490836 438 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 RNU6-1278P-201ENST00000516130 107 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 RNU2-58P-201ENST00000516403 183 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 ATP5F1P5-201ENST00000526403 760 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 FAM60BP-201ENST00000578364 658 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 VN1R85P-201ENST00000601587 426 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 AC072026.1-201ENST00000605023 201 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 MIR6500-201ENST00000622700 86 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 AC021753.1-201ENST00000635724 168 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 U4.7-201ENST00000638126 106 ntBASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.11□□□□□ -1.75
ATP13A1Q9HD20 AL359854.1-201ENST00000614203 1594 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 Y_RNA.245-201ENST00000364493 95 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 RNU6-336P-201ENST00000364891 107 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 RNU6-326P-201ENST00000365480 107 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 MIR1251-201ENST00000408552 70 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 SNORA3C-201ENST00000408792 125 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 AC011742.1-201ENST00000431448 434 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 TBCAP1-201ENST00000436520 327 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 AL353748.1-201ENST00000440753 474 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 snoU13.30-201ENST00000458951 104 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 TOMM22P6-201ENST00000465035 409 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 RPS29P26-201ENST00000477483 171 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 RN7SL271P-201ENST00000487601 295 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 AC078817.1-201ENST00000492623 435 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 RPL31P61-201ENST00000496160 376 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 RPL7P47-201ENST00000497299 556 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 AC010265.1-201ENST00000513509 211 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 SNORA31.19-201ENST00000517079 126 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 AP004242.1-201ENST00000533701 349 ntBASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.1□□□□□ -1.75
ATP13A1Q9HD20 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms