Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.34□□□□□ -1.71
CBX8Q9HC52 AC078918.1-201ENST00000498515 228 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 AC093840.1-201ENST00000511599 336 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 RNU6-1012P-201ENST00000516606 109 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 SNORA43.2-201ENST00000516652 128 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 AF186190.1-201ENST00000517470 480 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 DEFB108E-201ENST00000524692 240 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 CASP1P1-201ENST00000526345 212 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 CYCSP29-201ENST00000533731 318 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 MRPS36P4-201ENST00000534436 298 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 AC010186.2-204ENST00000537668 439 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.34□□□□□ -1.71
CBX8Q9HC52 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.34□□□□□ -1.71
CBX8Q9HC52 AC120057.2-201ENST00000571520 271 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 AC090617.3-201ENST00000573670 475 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 AC130289.1-201ENST00000577321 73 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 MIR4782-201ENST00000577987 79 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 MIR4277-201ENST00000578298 84 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.34□□□□□ -1.71
CBX8Q9HC52 AC024153.1-201ENST00000603103 365 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.34□□□□□ -1.71
CBX8Q9HC52 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CBX8Q9HC52 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 RNA5SP509-201ENST00000364577 119 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 RNU4-9P-201ENST00000364951 139 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 Y_RNA.462-201ENST00000384268 102 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 MIR325-201ENST00000385260 98 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 AL603910.2-201ENST00000407268 136 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 RNU2-71P-201ENST00000411395 189 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 RPL21P40-201ENST00000428586 483 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 RPS6P12-201ENST00000432491 726 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 CYCSP32-201ENST00000440548 321 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 NUTF2P7-201ENST00000453086 375 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 AL139109.1-201ENST00000455491 297 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 snoU13.30-201ENST00000458951 104 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 TOMM22P6-201ENST00000465035 409 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 AC011276.1-201ENST00000469688 323 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 RNU6-1338P-201ENST00000516328 91 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 RNU6-1183P-201ENST00000517054 60 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 RRN3P3-201ENST00000549207 578 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 SCARNA4-201ENST00000629045 128 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 BMS1P21-201ENST00000634565 365 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 MIR6830-201ENST00000636015 70 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 AL450472.1-202ENST00000637286 180 ntBASIC4.33□□□□□ -1.72
CBX8Q9HC52 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CBX8Q9HC52 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CBX8Q9HC52 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CBX8Q9HC52 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.33□□□□□ -1.72
CBX8Q9HC52 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CBX8Q9HC52 MAPK10-373ENST00000641983 6772 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 AP001148.1-201ENST00000624124 2359 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.32□□□□□ -1.72
CBX8Q9HC52 FTLP6-201ENST00000355274 422 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 RNU6-1301P-201ENST00000362724 104 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 RNU6-942P-201ENST00000363002 107 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 Y_RNA.143-201ENST00000363520 106 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 RNU1-64P-201ENST00000365443 163 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 RNA5SP366-201ENST00000365454 123 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 Y_RNA.555-201ENST00000384673 110 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 Y_RNA.581-201ENST00000391017 97 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 AL079342.1-201ENST00000401460 267 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 AP000907.1-201ENST00000428428 510 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 TBCAP1-201ENST00000436520 327 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.32□□□□□ -1.72
CBX8Q9HC52 UBE2CP3-201ENST00000502715 450 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.32□□□□□ -1.72
CBX8Q9HC52 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CBX8Q9HC52 RN7SKP122-201ENST00000515923 296 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 RNA5SP208-201ENST00000516156 78 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 RNU6-182P-201ENST00000516970 105 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 YPEL5P3-201ENST00000547227 352 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 MIR3160-1-201ENST00000577972 85 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 MIR4298-201ENST00000584380 73 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.32□□□□□ -1.72
CBX8Q9HC52 AC240442.1-201ENST00000616055 283 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 AC241585.2-209ENST00000638217 143 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CBX8Q9HC52 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CBX8Q9HC52 AC233981.2-201ENST00000611524 1614 ntBASIC4.32□□□□□ -1.72
CBX8Q9HC52 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CBX8Q9HC52 Y_RNA.16-201ENST00000362421 102 ntBASIC4.31□□□□□ -1.72
CBX8Q9HC52 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.31□□□□□ -1.72
CBX8Q9HC52 RNU6-217P-201ENST00000384164 104 ntBASIC4.31□□□□□ -1.72
CBX8Q9HC52 RNU6-17P-201ENST00000384245 107 ntBASIC4.31□□□□□ -1.72
CBX8Q9HC52 RNU6-18P-201ENST00000384527 107 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms