Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
POLR1BQ9H9Y6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 SNORA68.1-201ENST00000364537 132 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 MIR514A2-201ENST00000385131 88 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 MIR514A3-201ENST00000385132 88 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AL590004.2-201ENST00000404787 371 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 RPS4XP7-201ENST00000406274 780 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 BX682237.1-201ENST00000415016 335 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AL451074.5-201ENST00000415894 435 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AL513477.1-202ENST00000417061 214 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AL109933.2-201ENST00000452651 260 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AL590639.1-201ENST00000456484 337 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AC011352.1-201ENST00000512300 793 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 CENPUP1-201ENST00000526649 1202 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AC090115.3-201ENST00000553218 849 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 MTCO3P13-201ENST00000577757 781 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AP000787.2-201ENST00000604432 568 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AC026585.1-201ENST00000619582 524 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
POLR1BQ9H9Y6 HAUS6P2-201ENST00000433254 2404 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 RNU4-66P-201ENST00000365199 138 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 MIR147B-201ENST00000390185 80 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 SNORA26.7-201ENST00000391288 122 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 RPL21P75-201ENST00000396599 483 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 RPL21P28-201ENST00000401418 483 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 FO393413.1-201ENST00000402892 195 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AL139095.1-201ENST00000404326 391 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 RNU6-1068P-201ENST00000410958 103 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 MTND3P16-201ENST00000452205 344 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 RPL21P39-201ENST00000463605 483 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AC107626.1-201ENST00000471084 183 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 RPL21P93-201ENST00000480465 489 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AC087190.1-201ENST00000484462 480 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AC093591.1-201ENST00000491435 481 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 RPL21P16-201ENST00000495531 483 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 Y_RNA.654-201ENST00000497848 106 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 CCDC34P1-201ENST00000507441 517 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 Y_RNA.687-201ENST00000516558 91 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 SNORA25.17-201ENST00000517184 124 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 CR383656.8-201ENST00000549046 145 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 MIR5583-1-201ENST00000580941 59 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AC146944.4-201ENST00000602697 718 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AC024153.1-201ENST00000603103 365 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AL670379.10-201ENST00000604330 253 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AL670379.9-201ENST00000605428 253 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AC092794.1-201ENST00000612734 582 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 U6atac.1-201ENST00000616025 117 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 AC103705.1-201ENST00000619013 241 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 Z69720.2-201ENST00000624755 279 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 MIR3688-2-201ENST00000636963 87 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 MIR3529-201ENST00000637713 78 ntBASIC2.84□□□□□ -1.95
POLR1BQ9H9Y6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.84□□□□□ -1.96
POLR1BQ9H9Y6 AC010329.5-201ENST00000623497 2174 ntBASIC2.84□□□□□ -1.96
POLR1BQ9H9Y6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 OR4G1P-203ENST00000641984 1631 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-451P-201ENST00000362921 107 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-942P-201ENST00000363002 107 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-1090P-201ENST00000364065 94 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 SNORD56.5-201ENST00000364281 72 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 Y_RNA.231-201ENST00000364358 102 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AL513475.1-201ENST00000406602 315 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 RPLP0P7-201ENST00000416050 667 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 PGBD4P6-201ENST00000421501 610 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AL365400.1-201ENST00000431854 640 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AC087499.2-201ENST00000432861 149 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AL121601.2-201ENST00000438019 707 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AL513043.1-201ENST00000439124 535 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AC108938.1-201ENST00000451204 136 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 DYNLL1P5-201ENST00000467158 270 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 RPS27AP9-201ENST00000477681 438 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 RPL21P99-201ENST00000480369 423 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 MRPL42P6-201ENST00000486397 371 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 AC114781.4-201ENST00000513707 639 ntBASIC2.83□□□□□ -1.96
POLR1BQ9H9Y6 RNU6-189P-201ENST00000516120 101 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms