Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC012360.2-201ENST00000609349 391 ntBASIC1.44□□□□□ -2.18
CHMP4BQ9H444 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.44□□□□□ -2.18
CHMP4BQ9H444 AL512643.1-201ENST00000635735 524 ntBASIC1.44□□□□□ -2.18
CHMP4BQ9H444 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 RNU6-1010P-201ENST00000362757 107 ntBASIC1.43□□□□□ -2.18
CHMP4BQ9H444 RNA5SP99-201ENST00000364020 114 ntBASIC1.43□□□□□ -2.18
CHMP4BQ9H444 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 SNORA40C-201ENST00000391285 128 ntBASIC1.43□□□□□ -2.18
CHMP4BQ9H444 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 RAC1P6-201ENST00000423911 575 ntBASIC1.43□□□□□ -2.18
CHMP4BQ9H444 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 CR769776.1-201ENST00000441254 787 ntBASIC1.43□□□□□ -2.18
CHMP4BQ9H444 MTCO2P25-201ENST00000447065 681 ntBASIC1.43□□□□□ -2.18
CHMP4BQ9H444 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 MED28P2-201ENST00000475771 317 ntBASIC1.43□□□□□ -2.18
CHMP4BQ9H444 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 MIR6078-201ENST00000611069 100 ntBASIC1.43□□□□□ -2.18
CHMP4BQ9H444 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.43□□□□□ -2.18
CHMP4BQ9H444 uc_338.15-201ENST00000615470 191 ntBASIC1.43□□□□□ -2.18
CHMP4BQ9H444 AC092125.1-201ENST00000562568 1995 ntBASIC1.43□□□□□ -2.18
CHMP4BQ9H444 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.42□□□□□ -2.18
CHMP4BQ9H444 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHMP4BQ9H444 RNU6-166P-201ENST00000384371 107 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 SNORA48.1-201ENST00000390879 135 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 RNA5SP100-201ENST00000410903 110 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 RNA5SP59-201ENST00000410922 110 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 RPS12P24-201ENST00000412619 387 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 SRIP3-201ENST00000413200 219 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.42□□□□□ -2.18
CHMP4BQ9H444 AC083875.1-201ENST00000419509 405 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.42□□□□□ -2.18
CHMP4BQ9H444 MTND5P25-201ENST00000430499 799 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 ZNF886P-201ENST00000450781 723 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.42□□□□□ -2.18
CHMP4BQ9H444 AC113347.3-201ENST00000509113 148 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
CHMP4BQ9H444 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 AC022616.8-201ENST00000533569 253 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 AP003034.1-201ENST00000534621 422 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 AC008507.2-201ENST00000588402 1176 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 VN1R83P-201ENST00000595685 445 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 AP001981.2-201ENST00000603241 418 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.42□□□□□ -2.18
CHMP4BQ9H444 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CHMP4BQ9H444 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 RNU6-817P-201ENST00000391083 104 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AC004965.1-201ENST00000413033 213 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 USP9YP18-201ENST00000425912 695 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AC013262.1-201ENST00000426710 252 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 USP9YP17-201ENST00000444617 696 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AL121594.1-201ENST00000475906 575 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AP001025.1-201ENST00000486139 332 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 RNU6-965P-201ENST00000516721 96 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 MTND1P36-201ENST00000522384 936 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AC025678.1-201ENST00000567861 338 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 BNIP3P30-201ENST00000601184 574 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AC012065.4-201ENST00000602445 679 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 MTATP6P2-201ENST00000603319 678 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AC007363.1-201ENST00000604736 620 ntBASIC1.41□□□□□ -2.18
CHMP4BQ9H444 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.41□□□□□ -2.18
CHMP4BQ9H444 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHMP4BQ9H444 AL391987.6-201ENST00000305671 199 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 RNU6-944P-201ENST00000364023 107 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 MIR320C1-201ENST00000408566 88 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 MIR1285-1-201ENST00000408593 84 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 AC016831.2-201ENST00000417179 352 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.4□□□□□ -2.19
CHMP4BQ9H444 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.4□□□□□ -2.19
CHMP4BQ9H444 MTCO1P27-201ENST00000448269 226 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.4□□□□□ -2.19
CHMP4BQ9H444 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 RNVU1-2-201ENST00000516326 135 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 AC109329.1-201ENST00000518744 317 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 COPS8P3-201ENST00000526024 482 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.4□□□□□ -2.19
CHMP4BQ9H444 DEFB108A-201ENST00000530110 222 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 AP003122.4-201ENST00000530980 758 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 TRAV32-201ENST00000553993 340 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 AC019288.1-201ENST00000557918 224 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 VN1R80P-201ENST00000597126 338 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 WISP1-OT1-201ENST00000602893 642 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 AL512427.1-201ENST00000618593 349 ntBASIC1.4□□□□□ -2.19
CHMP4BQ9H444 FARSBP1-201ENST00000435808 1778 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms