Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS16Q9H269 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS16Q9H269 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS16Q9H269 MIR2053-201ENST00000459295 91 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS16Q9H269 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.39□□□□□ -1.87
VPS16Q9H269 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS16Q9H269 AC008526.1-201ENST00000509149 338 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS16Q9H269 HIGD1AP13-201ENST00000509878 289 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 TBCAP3-201ENST00000512475 312 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 SNORA31.1-201ENST00000515993 133 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 SNORA31.5-201ENST00000516190 133 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 Y_RNA.720-201ENST00000517166 92 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS16Q9H269 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS16Q9H269 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS16Q9H269 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS16Q9H269 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS16Q9H269 AC004832.5-201ENST00000608677 401 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 AC091925.1-201ENST00000623204 462 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 AC073308.1-201ENST00000623696 305 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS16Q9H269 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS16Q9H269 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
VPS16Q9H269 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS16Q9H269 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS16Q9H269 RNU6-1115P-201ENST00000362490 106 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 RNU6-270P-201ENST00000364131 105 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 RNU6-434P-201ENST00000384376 107 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 RNU6-393P-201ENST00000384475 107 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 SNORD67-201ENST00000390833 111 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 MIR450B-201ENST00000401182 78 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 RNU6-1025P-201ENST00000410629 104 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS16Q9H269 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VPS16Q9H269 AL353705.1-201ENST00000433468 480 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 Z75741.1-201ENST00000446793 314 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS16Q9H269 AC079140.5-201ENST00000507882 310 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 SNORD59.2-201ENST00000516873 68 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 RN7SKP295-201ENST00000517264 153 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS16Q9H269 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS16Q9H269 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS16Q9H269 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS16Q9H269 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS16Q9H269 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS16Q9H269 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS16Q9H269 MIR5690-201ENST00000583739 73 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 MIR5692C1-201ENST00000585309 91 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS16Q9H269 AC008739.3-201ENST00000603262 127 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 AL355598.1-201ENST00000604169 202 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 AL132822.1-201ENST00000617063 513 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 AL669831.3-213ENST00000636676 183 ntBASIC3.38□□□□□ -1.87
VPS16Q9H269 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS16Q9H269 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
VPS16Q9H269 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
VPS16Q9H269 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS16Q9H269 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS16Q9H269 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS16Q9H269 AC103988.1-201ENST00000566382 2177 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 RNU6-715P-201ENST00000365204 103 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 SNORD70.1-201ENST00000391007 85 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS16Q9H269 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS16Q9H269 AC099548.1-201ENST00000421443 426 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 HMGN2P30-201ENST00000423237 256 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS16Q9H269 AL669831.1-202ENST00000428504 417 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 AC009969.1-201ENST00000438726 172 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 AC087884.1-201ENST00000469738 328 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 RPS26P21-201ENST00000475397 348 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 RN7SL283P-201ENST00000489055 303 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
VPS16Q9H269 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS16Q9H269 RN7SKP43-201ENST00000516173 320 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 RNU6-1069P-201ENST00000516612 133 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 RNU6-988P-201ENST00000519081 107 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS16Q9H269 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS16Q9H269 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS16Q9H269 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS16Q9H269 MIR4429-201ENST00000580105 73 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 AC019176.2-201ENST00000611579 315 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 AL078596.1-201ENST00000624856 447 ntBASIC3.37□□□□□ -1.87
VPS16Q9H269 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS16Q9H269 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS16Q9H269 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS16Q9H269 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS16Q9H269 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS16Q9H269 MTND5P30-201ENST00000452896 1731 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS16Q9H269 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS16Q9H269 SNORA71.3-201ENST00000362582 128 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 Y_RNA.399-201ENST00000383955 105 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 RNU6-1040P-201ENST00000383974 107 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 MIR670-201ENST00000390142 98 ntBASIC3.36□□□□□ -1.87
VPS16Q9H269 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms