Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AL365361.1-201ENST00000566942 3481 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 RNU6-254P-201ENST00000363377 107 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 SNORA14A-201ENST00000364773 135 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 RNU6-7-201ENST00000364784 107 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 RNU6-8-201ENST00000365467 107 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 RNU6-217P-201ENST00000384164 104 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 RNU6-45P-201ENST00000384471 107 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 SNORA1.3-201ENST00000384676 136 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 RPS4XP7-201ENST00000406274 780 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 RNA5SP38-201ENST00000410750 119 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 RNU2-68P-201ENST00000410878 191 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 POLHP1-201ENST00000411806 470 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 BX682237.1-201ENST00000415016 335 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.1□□□□□ -1.91
CDT1Q9H211 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.1□□□□□ -1.91
CDT1Q9H211 AL360271.2-201ENST00000447710 161 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AL590664.1-201ENST00000448065 339 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 RPS27P29-201ENST00000463110 252 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AC087884.1-201ENST00000469738 328 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.1□□□□□ -1.91
CDT1Q9H211 AC022493.1-201ENST00000492984 337 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AC006445.2-201ENST00000510061 472 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.1□□□□□ -1.91
CDT1Q9H211 AC005741.1-201ENST00000511094 432 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.1□□□□□ -1.91
CDT1Q9H211 AC104136.1-201ENST00000512969 394 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 RN7SKP132-201ENST00000516001 208 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 RNA5SP367-201ENST00000516557 118 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.1□□□□□ -1.91
CDT1Q9H211 AC079600.2-201ENST00000550076 130 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.1□□□□□ -1.91
CDT1Q9H211 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.1□□□□□ -1.91
CDT1Q9H211 MIR548AC-201ENST00000585049 88 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AC073539.2-201ENST00000597113 165 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AC012119.1-201ENST00000603184 222 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AC092747.3-201ENST00000603769 301 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 HSPE1P7-201ENST00000604681 321 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 ATP1B3P1-201ENST00000605365 821 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.1□□□□□ -1.91
CDT1Q9H211 FTX_3.1-201ENST00000610451 147 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AC084781.2-201ENST00000615568 161 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 AL359693.1-201ENST00000614959 2407 ntBASIC3.1□□□□□ -1.91
CDT1Q9H211 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.09□□□□□ -1.91
CDT1Q9H211 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.09□□□□□ -1.91
CDT1Q9H211 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CDT1Q9H211 Y_RNA.33-201ENST00000362591 102 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 RNU6-270P-201ENST00000364131 105 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 Y_RNA.259-201ENST00000364619 101 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.09□□□□□ -1.91
CDT1Q9H211 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDT1Q9H211 Y_RNA.387-201ENST00000383918 102 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 SNORA75B-201ENST00000384053 137 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 RNU6-43P-201ENST00000384302 107 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 Y_RNA.530-201ENST00000384587 101 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CDT1Q9H211 MIR548K-201ENST00000408406 116 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 MIR548F5-201ENST00000408421 86 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 MIR1289-1-201ENST00000408836 144 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 RNU6-1025P-201ENST00000410629 104 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 RN7SKP284-201ENST00000411002 343 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 AL592148.1-201ENST00000413568 445 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 USP9YP20-201ENST00000419224 558 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.09□□□□□ -1.91
CDT1Q9H211 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.09□□□□□ -1.91
CDT1Q9H211 AC105272.1-201ENST00000438604 198 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.09□□□□□ -1.91
CDT1Q9H211 Y_RNA.654-201ENST00000497848 106 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.09□□□□□ -1.91
CDT1Q9H211 RNU2-69P-201ENST00000516061 100 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 AC009902.1-201ENST00000519351 183 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDT1Q9H211 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.09□□□□□ -1.91
CDT1Q9H211 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.09□□□□□ -1.91
CDT1Q9H211 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.09□□□□□ -1.91
CDT1Q9H211 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.09□□□□□ -1.91
CDT1Q9H211 APOOP1-201ENST00000604695 592 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 FAM157A-202ENST00000615155 405 ntBASIC3.09□□□□□ -1.91
CDT1Q9H211 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.09□□□□□ -1.91
CDT1Q9H211 AC121333.1-201ENST00000567488 2709 ntBASIC3.09□□□□□ -1.92
CDT1Q9H211 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDT1Q9H211 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
CDT1Q9H211 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CDT1Q9H211 RNU1-35P-201ENST00000362782 153 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 RNU6-434P-201ENST00000384376 107 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 RNA5SP219-201ENST00000390940 113 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 SNORA75.4-201ENST00000391278 119 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 VN1R36P-201ENST00000414936 291 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 SAR1AP4-201ENST00000429225 591 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.08□□□□□ -1.92
CDT1Q9H211 DYNLL1P5-201ENST00000467158 270 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.08□□□□□ -1.92
CDT1Q9H211 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.08□□□□□ -1.92
CDT1Q9H211 MTND3P25-201ENST00000509243 135 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 Y_RNA.718-201ENST00000517110 102 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.08□□□□□ -1.92
CDT1Q9H211 AC025755.1-201ENST00000521306 278 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 APOOP3-201ENST00000536787 586 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 AP000763.2-201ENST00000540641 163 ntBASIC3.08□□□□□ -1.92
CDT1Q9H211 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.08□□□□□ -1.92
CDT1Q9H211 GTF3AP2-201ENST00000557014 266 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms